LOCUS BC006464 1133 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calmodulin 2 (phosphorylase kinase, delta), mRNA (cDNA
clone MGC:2168 IMAGE:3542044), complete cds.
ACCESSION BC006464
VERSION BC006464.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1133)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1133)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20428653.
FEATURES Location/Qualifiers
source 1..1133
/db_xref="H-InvDB:HIT000032850"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2168 IMAGE:3542044"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1133
/gene="CALM2"
/gene_synonym="CAMII"
/gene_synonym="PHKD"
/gene_synonym="PHKD2"
/db_xref="GeneID:805"
/db_xref="HGNC:HGNC:1445"
/db_xref="MIM:114182"
CDS 59..508
/gene="CALM2"
/gene_synonym="CAMII"
/gene_synonym="PHKD"
/gene_synonym="PHKD2"
/codon_start=1
/product="calmodulin 2 (phosphorylase kinase, delta)"
/protein_id="AAH06464.1"
/db_xref="GeneID:805"
/db_xref="HGNC:HGNC:1445"
/db_xref="MIM:114182"
/translation="MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP
TEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYIS
AAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK"
BASE COUNT 362 a 177 c 238 g 356 t
ORIGIN
1 gagagagcga gctgagtggt tgtgtggtcg cgtctcggaa accggtagcg cttgcagcat
61 ggctgaccaa ctgactgaag agcagattgc agaattcaaa gaagcttttt cactatttga
121 caaagatggt gatggaacta taacaacaaa ggaattggga actgtaatga gatctcttgg
181 gcagaatccc acagaagcag agttacagga catgattaat gaagtagatg ctgatggtaa
241 tggcacaatt gacttccctg aatttctgac aatgatggca agaaaaatga aagacacaga
301 cagtgaagaa gaaattagag aagcattccg tgtgtttgat aaggatggca atggctatat
361 tagtgctgca gaacttcgcc atgtgatgac aaaccttgga gagaagttaa cagatgaaga
421 agttgatgaa atgatcaggg aagcagatat tgatggtgat ggtcaagtaa actatgaaga
481 gtttgtacaa atgatgacag caaagtgaag accttgtaca gaatgtgtta aatttcttgt
541 acaaaattgt ttatttgcct tttctttgtt tgtaacttat ctgtaaaagg tttctcccta
601 ctgtcaaaaa aatatgcatg tatagtaatt aggacttcat tcctccatgt tttcttccct
661 tatcttactg tcattgtcct aaaaccttat tttagaaaat tgatcaagta acatgttgca
721 tgtggcttac tctggatata tctaagccct tctgcacatc taaacttaga tggagttggt
781 caaatgaggg aacatctggg ttatgccttt tttaaagtag ttttctttag gaactgtcag
841 catgttgttg ttgaagtgtg gagttgtaac tctgcgtgga ctatggacag tcaacaatat
901 gtacttaaaa gttgcactat tgcaaaacgg gtgtattatc caggtactcg tacactattt
961 ttttgtactg ctggtcctgt accagaaaca ttttctttta ttgttacttg ctttttaaac
1021 tttgtttagc cacttaaaat ctgcttatgg cacaatttgc ctcaaaatcc attccaagtt
1081 gtatatttgt tttccaataa aaaaattaca atttaaaaaa aaaaaaaaaa aaa
//