LOCUS BC006413 1634 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast), mRNA (cDNA clone MGC:10787 IMAGE:3609062), complete cds.
ACCESSION BC006413
VERSION BC006413.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1634)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1634)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: g Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5174722.
FEATURES Location/Qualifiers
source 1..1634
/db_xref="H-InvDB:HIT000032819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10787 IMAGE:3609062"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1634
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/db_xref="GeneID:10452"
/db_xref="HGNC:HGNC:18001"
/db_xref="MIM:608061"
CDS 37..1122
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/codon_start=1
/product="translocase of outer mitochondrial membrane 40
homolog (yeast)"
/protein_id="AAH06413.1"
/db_xref="GeneID:10452"
/db_xref="HGNC:HGNC:18001"
/db_xref="MIM:608061"
/translation="MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSL
GAGTRTSRSSERTPGAATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVK
LTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSL
NAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILV
AHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYH
KASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPP
LPLTLALGAFLNHRKNKFQCGFGLTIG"
BASE COUNT 346 a 526 c 494 g 268 t
ORIGIN
1 ccaggccggg agcaggcgcc gccgccacag gcgaccatgg ggaacgtgtt ggctgccagc
61 tcgccgcccg cagggccgcc accgccgcct gcgccggccc tcgtggggct gccgccacct
121 ccgccctcgc cgccgggctt cacgctgccg ccgctgggag gcagcctggg cgccggcacc
181 aggacgagtc gaagttcgga acggaccccc ggggctgcaa ccgccagcgc ctcaggggcc
241 gccgaggatg gggcctgcgg ctgcctgccc aacccgggca cattcgagga gtgccaccgg
301 aagtgcaagg agctgtttcc cattcagatg gagggtgtca agctcacagt caacaaaggg
361 ttgagtaacc attttcaggt caaccacaca gtagccctca gcacaatcgg ggagtccaac
421 taccacttcg gggtcacata tgtggggaca aagcagctga gtcccacaga ggcgttccct
481 gtactggtgg gtgacatgga caacagtggc agtctcaacg ctcaggtcat tcaccagctg
541 ggccccggtc tcaggtccaa gatggccatc cagacccagc agtcgaagtt tgtgaactgg
601 caggtggacg gggagtatcg gggctctgac ttcacagcag ccgtcaccct ggggaaccca
661 gacgtcctcg tgggttcagg aatcctcgta gcccactacc tccagagcat cacgccttgc
721 ctggccctgg gtggagagct ggtctaccac cggcggcctg gagaggaggg cactgtcatg
781 tctctagctg ggaaatacac attgaacaac tggttggcaa cggtaacgtt gggccaggcg
841 ggcatgcacg caacatacta ccacaaagcc agtgaccagc tgcaggtggg tgtggagttt
901 gaggccagca caaggatgca ggacaccagc gtctccttcg ggtaccagct ggacctgccc
961 aaggccaacc tcctcttcaa aggctctgtg gatagcaact ggatcgtggg tgccacgctg
1021 gagaagaagc tcccacccct gcccctgaca ctggcccttg gggccttcct gaatcaccgc
1081 aagaacaagt ttcagtgtgg ctttggcctc accatcggct gagccctcct ggcccccgcc
1141 ttccacgccc ttccgattcc acctccacct ccacctcccc ctgccacaga ggggagacct
1201 gagcccccct cccttccctc cccccttggg ggtcgggggg ggacattgga aaggagggac
1261 cccgccaccc cagcagctga ggaggggatt ctggaactga atggcgcttc gggattctga
1321 gtagcagggg cagcatgccc agtgggcctg gggtcccggg agggattccg gaattgaggg
1381 gcacgcagga ttctgagcac caggggcaga ggcggccaga caacctcagg gaggagtgtc
1441 ctggcgtccc catcctccaa agggcctggg cccgccccga gggggcagcg agaggagctt
1501 ccccatcccc ggtcagtcca ccctgccccg tccactttcc catctcctcg gtataaatca
1561 tgtttataag ttatggaaga accgggacat tttacagaaa aaaaacaaaa aacaacaaaa
1621 aaaaaaaaaa aaaa
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