LOCUS BC006403 1938 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NCK adaptor protein 1, mRNA (cDNA clone MGC:12668
IMAGE:4304621), complete cds.
ACCESSION BC006403
VERSION BC006403.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1938)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1938)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006403.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33519482.
FEATURES Location/Qualifiers
source 1..1938
/db_xref="H-InvDB:HIT000032811"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12668 IMAGE:4304621"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1938
/gene="NCK1"
/gene_synonym="MGC12668"
/gene_synonym="NCKalpha"
/db_xref="GeneID:4690"
/db_xref="HGNC:HGNC:7664"
/db_xref="MIM:600508"
CDS 108..1241
/gene="NCK1"
/gene_synonym="MGC12668"
/gene_synonym="NCKalpha"
/codon_start=1
/product="NCK adaptor protein 1"
/protein_id="AAH06403.1"
/db_xref="GeneID:4690"
/db_xref="HGNC:HGNC:7664"
/db_xref="MIM:600508"
/translation="MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNS
MNKTGFVPSNYVERKNSARKASIVKNLKDTLGIGKVKRKPSVPDSASPADDSFVDPGE
RLYDLNMPAYVKFNYMAEREDELSLIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV
TEEGDSPLGDHVGSLSEKLAAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMD
VIEKPENDPEWWKCRKINGMVGLVPKNYVTVMQNNPLTSGLEPSPPQCDYIRPSLTGK
FAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQL
KETVYCIGQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKHLS"
BASE COUNT 626 a 327 c 410 g 575 t
ORIGIN
1 ccaagagcta cgcggcggcg gcggagcgca ggcctcgtgc cgttacggcc atcacggcgg
61 ccgcagtggc gtcctggagc cctcctcagt gctgaagctg ctgaaagatg gcagaagaag
121 tggtggtagt agccaaattt gattatgtgg cccaacaaga acaagagttg gacatcaaga
181 agaatgagag attatggctt ctggatgatt ctaagtcctg gtggcgagtt cgaaattcca
241 tgaataaaac aggttttgtg ccttctaact atgtggaaag gaaaaacagt gctcggaaag
301 catctattgt gaaaaaccta aaggatacct taggcattgg aaaagtgaaa agaaaaccta
361 gtgtgccaga ttctgcatct cctgctgatg atagttttgt tgacccaggg gaacgtctct
421 atgacctcaa catgcccgct tatgtgaaat ttaactacat ggctgagaga gaggatgaat
481 tatcattgat aaaggggaca aaggtgatcg tcatggagaa atgcagtgat gggtggtggc
541 gtggtagcta caatggacaa gttggatggt tcccttcaaa ctatgtaact gaagaaggtg
601 acagtccttt gggtgaccat gtgggttctc tgtcagagaa attagcagca gtcgtcaata
661 acctaaatac tgggcaagtg ttgcatgtgg tacaggctct ttacccattc agctcatcta
721 atgatgaaga acttaatttc gagaaaggag atgtaatgga tgttattgaa aaacctgaaa
781 atgacccaga gtggtggaaa tgcaggaaga tcaatggtat ggttggtcta gtaccaaaaa
841 actatgttac cgttatgcag aataatccat taacttcagg tttggaacca tcacctccac
901 agtgtgatta cattaggcct tcactcactg gaaagtttgc tggcaatcct tggtattatg
961 gcaaagtcac caggcatcaa gcagaaatgg cattaaatga aagaggacat gaaggggatt
1021 tcctcattcg tgatagtgaa tcttcgccaa atgatttctc agtatcacta aaagcacaag
1081 ggaaaaacaa gcattttaaa gtccaactaa aagagactgt ctactgcatt gggcagcgta
1141 aattcagcac catggaagaa cttgtagaac attacaaaaa ggcaccaatt tttacaagtg
1201 aacaaggaga aaaattatat cttgtcaagc atttatcatg atactgctga ccagaagtga
1261 ctgctgtgta gctgtaattt gtcatgtaat tgaagactga gaaaatgttg ggtccagtcg
1321 tgcttgattg gaaattgttg tttctaaatc tatatgagaa ttgacaataa gtatttttat
1381 tataactcag cccatacata tatactatgt atgcagtgca tctgcataga acagttcctt
1441 atccttggcc ttctgtttta ttgttttttt ctttgctgtt ttccctttgc ttctaatatt
1501 acagttttgt attttgtaaa caaaaatcaa ataatgcata tcagaatctt tatatggaag
1561 aaatccttta ttgcctttcc tttgtttcct tgtaaaggca ccctgttctg ttatggtttt
1621 tcattatata aaattattat atctatatat gacatatgct aaaatttctt ggagagtgtt
1681 aatcttttct gtgactaaat agcaataata agtggaaaat tagaaattat ttccaggtat
1741 tatatttgtc acaggccatt gtaaatacca agtatattgt gtctgccata atttttaaaa
1801 atacattcat tgtcttcagt catacagcaa gacacatgag acatagatta gaaaacatgt
1861 tgtacaattt taatttacaa ctgttggaaa taaaaatcac ttaatttttt tccaaaaaaa
1921 aaaaaaaaaa aaaaaaaa
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