LOCUS BC006383 1862 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens glycosylphosphatidylinositol anchor attachment protein
1 homolog (yeast), mRNA (cDNA clone MGC:12663 IMAGE:4099139),
complete cds.
ACCESSION BC006383
VERSION BC006383.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1862)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1862)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006383.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6031166.
FEATURES Location/Qualifiers
source 1..1862
/db_xref="H-InvDB:HIT000032799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12663 IMAGE:4099139"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1862
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="IMGT/GENE-DB:4446"
/db_xref="MIM:603048"
CDS 64..1749
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/codon_start=1
/product="GPAA1 protein"
/protein_id="AAH06383.2"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="IMGT/GENE-DB:4446"
/db_xref="MIM:603048"
/translation="MGLLSDPVRRRALARLVLRLNAPLWALPVAWLERTMRSVGLEVY
TQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAVGL
LLALAAHFRGQIYWAKDIVFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQ
AAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPEDWT
SLDGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVAVG
KALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALELWM
QLHEAGMGLEEPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQHVA
TQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLALQL
GCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAALLVLTSPAATLLGSLFLWRELQ
EAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLGLYPCWLLFWNVLFWK"
BASE COUNT 300 a 618 c 556 g 388 t
ORIGIN
1 gtgggcaccg cggcggtagt tggaggcggg agagggtccg tagccgcgcc gccctgcccc
61 gccatgggcc tcctgtcgga cccggttcgc cggcgcgcgc tcgcccgcct agtgctgcgc
121 ctcaacgcgc cgttgtgggc tctgccagtg gcctggcttg aacggacgat gcggtcagta
181 gggctggagg tctacacgca gagtttctcc cggaaactgc ccttcccaga tgagacccac
241 gagcgctata tggtgtcggg caccaacgtg tacggcatcc tgcgggcccc gcgtgctgcc
301 agcaccgagt cgcttgtgct caccgtgccc tgtggctctg actctaccaa cagccaggct
361 gtggggctgc tgctggcact ggctgcccac ttccgggggc agatttattg ggccaaagat
421 atcgtcttcc tggtaacaga acatgacctt ctgggcactg aggcttggct tgaagcctac
481 cacgatgtca atgtcactgg catgcagtcg tctcccctgc agggccgagc tggggccatt
541 caggcagccg tggccctgga gctgagcagt gatgtggtca ccagcctcga tgtggccgtg
601 gaggggctta acgggcagct gcccaacctt gacctgctca atctcttcca gaccttctgc
661 cagaaagggg gcctgttgtg cacgcttcag ggcaagctgc agcccgagga ctggacatca
721 ttggatggac cgctgcaggg cctgcagaca ctgctgctca tggttctgcg gcaggcctcc
781 ggccgccccc acggctccca tggcctcttc ctgcgctacc gtgtggaggc cctaaccctg
841 cgtggcatca atagcttccg ccagtacaag tatgacctgg tggcagtggg caaggctttg
901 gagggcatgt tccgcaagct caaccacctc ctggagcgcc tgcaccagtc cttcttcctc
961 tacttgctcc ccggcctctc ccgcttcgtc tccatcggcc tctacatgcc cgctgtcggc
1021 ttcttgctcc tggtccttgg tctcaaggct ctggaactgt ggatgcagct gcatgaggct
1081 ggaatgggcc ttgaggagcc cgggggtgcc cctggcccca gtgtacccct tcccccatca
1141 cagggtgtgg ggctggcctc gctcgtggca cctctgctga tctcacaggc catgggactg
1201 gccctctatg tcctgccagt gctgggccaa cacgttgcca cccagcactt cccagtggca
1261 gaggctgagg ctgtggtgct gacactgctg gcgatttatg cagctggcct ggccctgccc
1321 cacaataccc accgggtggt aagcacacag gccccagaca ggggctggat ggcactgaag
1381 ctggtagccc tgatctacct agcactgcag ctgggctgca tcgccctcac caacttctca
1441 ctgggcttcc tgctggccac caccatggtg cccactgctg cgcttgccaa gcctcatggg
1501 ccccggaccc tctatgctgc cctgctggtg ctgaccagcc cggcagccac gctccttggc
1561 agcctgttcc tgtggcggga gctgcaggag gcgccactgt cactggccga gggctggcag
1621 ctcttcctgg cagcgctagc ccagggtgtg ctggagcacc acacctacgg cgccctgctc
1681 ttcccactgc tgtccctggg cctctacccc tgctggctgc ttttctggaa tgtgctcttc
1741 tggaagtgag atctgcctgt ccgggctggg acagagactc cccaaggacc ccattctgcc
1801 tccttctggg gaaataaatg agtgtctgtt tcagcagcta aaataaaaaa aaaaaaaaaa
1861 aa
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