LOCUS BC006323 2360 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member
7, mRNA (cDNA clone MGC:12887 IMAGE:4138236), complete cds.
ACCESSION BC006323
VERSION BC006323.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2360)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2360)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC006323.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: k Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42490748.
FEATURES Location/Qualifiers
source 1..2360
/db_xref="H-InvDB:HIT000032757"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12887 IMAGE:4138236"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2360
/gene="ABCB7"
/gene_synonym="ASAT"
/gene_synonym="Atm1p"
/gene_synonym="EST140535"
/db_xref="GeneID:22"
/db_xref="HGNC:HGNC:48"
/db_xref="MIM:300135"
CDS 2..2263
/gene="ABCB7"
/gene_synonym="ASAT"
/gene_synonym="Atm1p"
/gene_synonym="EST140535"
/codon_start=1
/product="ATP-binding cassette, sub-family B (MDR/TAP),
member 7"
/protein_id="AAH06323.1"
/db_xref="GeneID:22"
/db_xref="HGNC:HGNC:48"
/db_xref="MIM:300135"
/translation="MALLAMHSWRWAAAAAAFEKRRHSAILIRPLVSVSGSGPQWRPH
QLGALGTARAYQQIPESLKSITWQRLGKGNSGQFLDAAKALQVWPLIEKRTCWHGHAG
GGLHTDPKEGLKDVDTRKIIKAMLSYVWPKDRPDLRARVAISLGFLGGAKAMNIVVPF
MFKYAVDSLNQMSGNMLNLSDAPNTVATMATAVLIGYGVSRAGAAFFNEVRNAVFGKV
AQNSIRRIAKNVFLHLHNLDLGFHLSRQTGALSKAIDRGTRGISFVLSALVFNLLPIM
FEVMLVSGVLYYKCGAQFALVTLGTLGTYTAFTVAVTRWRTRFRIEMNKADNDAGNAA
IDSLLNYETVKYFNNERYEAQRYDGFLKTYETASLKSTSTLAMLNFGQSAIFSVGLTA
IMVLASQGIVAGTLTVGDLVMVNGLLFQLSLPLNFLGTVYRETRQALIDMNTLFTLLK
VDTQIKDKVMASPLQITPQTATVAFDNVHFEYIEGQKVLSGISFEVPAGKKVAIVGGS
GSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYN
LLYGNISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAI
LKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQ
GKVAERGTHHGLLANPHSIYSEMWHTQSSRVQNHDNPKWEAKKENISKEEERKKLQEE
IVNSVKGCGNCSC"
BASE COUNT 699 a 463 c 567 g 631 t
ORIGIN
1 gatggcgctg ctcgcgatgc attcttggcg ctgggcggcc gcggcggctg ctttcgaaaa
61 gcgccggcac tccgcgattc tgatccggcc tttagtctct gttagcggct caggtccgca
121 gtggaggcca catcaactcg gcgccttggg aaccgctcga gcctaccagc agattccaga
181 gtcattaaaa agtatcacat ggcagagatt gggaaaaggc aattcaggac agttcttaga
241 tgctgcaaag gctctccagg tatggccact gatagaaaag aggacatgtt ggcatggtca
301 tgcaggagga ggactccaca cagacccaaa agaagggtta aaagatgttg atactcggaa
361 aatcataaaa gcaatgcttt cttatgtgtg gcccaaagac aggccagatc tacgagctag
421 agttgccatt tcgctgggat ttttgggtgg tgcaaaggcc atgaatattg tggttccctt
481 catgtttaaa tatgctgtag acagcctcaa ccagatgtcg ggaaacatgc tgaacctgag
541 tgatgcacca aatacagttg caaccatggc aacagcagtt ctgattggct atggtgtatc
601 aagagctgga gctgcttttt ttaacgaagt tcgaaatgca gtatttggca aggtagccca
661 gaattcaatc cgaagaatag ccaaaaatgt ctttctccat cttcacaacc tggatctggg
721 ttttcacctg agcagacaga cgggagcttt atctaaggct attgacagag gaacaagggg
781 tatcagtttt gtcctgagtg ctttggtatt taatcttctt cccatcatgt ttgaagtgat
841 gcttgtcagt ggtgttttgt attacaaatg cggtgcccag tttgctttgg taacccttgg
901 aacacttggt acatacacag cattcacagt tgcagtcaca cggtggagaa ctagatttag
961 aatagaaatg aacaaagcag ataatgatgc aggtaatgct gctatagact cactgctgaa
1021 ttatgaaact gtgaagtatt ttaataatga aagatatgaa gcacagagat atgatggatt
1081 tttgaagacg tatgagactg cttcattgaa aagtacctct actctggcta tgctgaactt
1141 tggtcaaagt gctattttca gtgtcggttt aacagctata atggtgctcg ccagtcaggg
1201 aattgtggca ggtaccctta ctgttggaga tctagtaatg gtgaatggac tgctttttca
1261 gctttcatta cccctgaact ttctgggaac tgtatataga gagactagac aagcactcat
1321 agatatgaac accttgttta ctctactcaa ggtagacacc caaattaaag acaaagtgat
1381 ggcatctccc cttcagatca caccacagac agctaccgtg gcctttgata atgtgcattt
1441 tgaatacatt gagggccaga aagtccttag tggaatatcc tttgaagtcc ctgcaggaaa
1501 gaaagtggcc attgtaggag gtagtgggtc agggaaaagc acaatagtga ggctattatt
1561 tcgcttctat gagcctcaaa agggtagcat ttatcttgct ggtcaaaata tacaagatgt
1621 gagcctggaa agccttcgga gggcagtggg agtggtacct caggatgctg tcctcttcca
1681 taatactatt tattacaacc tcttatatgg aaacatcagt gcttcacctg aggaagtgta
1741 tgcagtggca aaattagctg gacttcatga tgcaattctt cgaatgccac atggatatga
1801 cacccaagta ggggaacgag gactcaagct ttcaggagga gaaaagcaaa gagtagcaat
1861 tgcaagagcc attttgaagg accccccagt catactctat gatgaagcta cttcatcgtt
1921 agattcgatt actgaagaga ctattcttgg tgccatgaag gatgtggtca aacacagaac
1981 ttctattttc attgcacaca gattgtcaac agtggttgat gcagatgaaa tcattgtctt
2041 ggatcagggt aaggtagccg aacgtggtac ccaccatggt ttgcttgcta accctcatag
2101 tatctattca gaaatgtggc atacacagag cagccgtgtg cagaaccatg ataaccccaa
2161 atgggaagca aagaaagaaa atatatccaa agaggaggaa agaaagaaac tacaagaaga
2221 aattgtcaat agtgtgaaag gctgtggaaa ctgttcgtgc taagtcacat aagacatttt
2281 ctttttttgt tgttttggac tacatatttg cactgaagca gaattgtttt attaaaaaaa
2341 tcatacattc ccaaaaaaaa
//