LOCUS BC006322 1946 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens activating transcription factor 3, mRNA (cDNA clone
MGC:12746 IMAGE:4138076), complete cds.
ACCESSION BC006322
VERSION BC006322.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1946)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1946)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC006322.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: k Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502262.
FEATURES Location/Qualifiers
source 1..1946
/db_xref="H-InvDB:HIT000032756"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12746 IMAGE:4138076"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1946
/gene="ATF3"
/db_xref="GeneID:467"
/db_xref="HGNC:HGNC:785"
/db_xref="MIM:603148"
CDS 166..711
/gene="ATF3"
/codon_start=1
/product="activating transcription factor 3"
/protein_id="AAH06322.1"
/db_xref="GeneID:467"
/db_xref="HGNC:HGNC:785"
/db_xref="MIM:603148"
/translation="MMLQHPGQVSASEVSASAIVPCLSPPGSLVFEDFANLTPFVKEE
LRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAK
CRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNG
RTPEDERNLFIQQIKEGTLQS"
BASE COUNT 511 a 474 c 500 g 461 t
ORIGIN
1 cgcagccagg cgcgcactgc acagctctct tctctcgccg ccgcccgagc gcacccttca
61 gcccgcgcgc cggccgtgag tcctcggtgc tcgcccgccg gccagacaaa cagcccgccc
121 gaccccgtcc cgaccctggc cgccccgagc ggagcctgga gcaaaatgat gcttcaacac
181 ccaggccagg tctctgcctc ggaagtgagt gcttctgcca tcgtcccctg cctgtcccct
241 cctgggtcac tggtgtttga ggattttgct aacctgacgc cctttgtcaa ggaagagctg
301 aggtttgcca tccagaacaa gcacctctgc caccggatgt cctctgcgct ggaatcagtc
361 actgtcagcg acagacccct cggggtgtcc atcacaaaag ccgaggtagc ccctgaagaa
421 gatgaaagga aaaagaggcg acgagaaaga aataagattg cagctgcaaa gtgccgaaac
481 aagaagaagg agaagacgga gtgcctgcag aaagagtcgg agaagctgga aagtgtgaat
541 gctgaactga aggctcagat tgaggagctc aagaacgaga agcagcattt gatatacatg
601 ctcaaccttc atcggcccac gtgtattgtc cgggctcaga atgggaggac tccagaagat
661 gagagaaacc tctttatcca acagataaaa gaaggaacat tgcagagcta agcagtcgtg
721 gtatgggggc gactggggag tcctcattga atcctcattt tatacccaaa accctgaagc
781 cattggagag ctgtcttcct gtgtacctct agaatcccag cagcagagaa ccatcaaggc
841 gggagggcct gcagtgattc agcaggccct tcccattctg ccccagagtg ggtcttggac
901 cagggcaagt gcatctttgc ctcaactcca ggatttaggc cttaacacac tggccattct
961 tatgttccag atggccccca gctggtgtcc tgcccgcctt tcatctggat tctacaaaaa
1021 accaggatgc ccaccgttag gattcaggca gcagtgtctg tacctcgggt gggagggatg
1081 gggccatctc cttcaccgtg gctaccattg tcactcgtag gggatgtgga gtgagaacag
1141 catttagtga agttgtgcaa cggccagggt tgtgctttct agcaaatatg ctgttatgtc
1201 cagaaattgt gtgtgcaaga aaactaggca atgtactctt ccgatgtttg tgtcacacaa
1261 cactgatgtg acttttatat gctttttctc agatctggtt tctaagagtt ttggggggcg
1321 gggctgtcac cacgtgcagt atctcaagat attcaggtgg ccagaagagc ttgtcagcaa
1381 gaggaggaca gaattctccc agcgttaaca caaaatccat gggcagcatg atggcaggtc
1441 ctctgttgca aactcagttc caaagtcaca ggaagaaagc agaaagttca acttccaaag
1501 ggttaggact ctccactcaa tgtcttaggt caggagttgt gtctaggctg gaagagccaa
1561 agaatattcc attttccttt ccttgtggtt gaaaaccaca gtcagtggag agatgtttgg
1621 aaaccacagt cagtggagcc tgggtggtac ccaggcttta gcattattgg atgtcaatag
1681 cattgttttt gtcatgtagc tgttttaaga aatctggccc agggtgtttg cagctgtgag
1741 aagtcactca cactggccac aaggacgctg gctactgtct attaaaattc tgatgtttct
1801 gtgaaattct cagagtgttt aattgtactc aatggtatca ttacaatttt ctgtaagaga
1861 aaatattact tatttatcct agtattccta acctgtcaga ataataaata ttggaaccaa
1921 gacatggtaa aaaaaaaaaa aaaaaa
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