LOCUS BC006121 1369 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens apoptosis-inducing factor, mitochondrion-associated,
2, mRNA (cDNA clone MGC:13000 IMAGE:3506309), complete cds.
ACCESSION BC006121
VERSION BC006121.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1369)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1369)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31563505.
FEATURES Location/Qualifiers
source 1..1369
/db_xref="H-InvDB:HIT000032619"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13000 IMAGE:3506309"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1369
/gene="AIFM2"
/gene_synonym="PRG3"
/gene_synonym="RP11-367H5.2"
/db_xref="GeneID:84883"
/db_xref="HGNC:HGNC:21411"
/db_xref="MIM:605159"
CDS 23..1144
/gene="AIFM2"
/gene_synonym="PRG3"
/gene_synonym="RP11-367H5.2"
/codon_start=1
/product="apoptosis-inducing factor,
mitochondrion-associated, 2"
/protein_id="AAH06121.1"
/db_xref="GeneID:84883"
/db_xref="HGNC:HGNC:21411"
/db_xref="MIM:605159"
/translation="MGSQVSVESGALHVVIVGGGFGGIAAASQLQALNVPFMLVDMKD
SFHHNVAALRASVETGFAKKTFISYSVTFKDNFRQGLVVGIDLKNQMVLLQGGEALPF
SHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGVEMAAE
IKTEYPEKEVTLIHSQVALADKELLPSVRQEVKEILLRKGVQLLLSERVSNLEELPLN
EYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKAFESRLASSGALRVNEHLQVEG
HSNVYAIGDCADVRTPKMAYLAGLHANIAVANIVNSVKQRPLQAYKPGALTFLLSMGR
NDGVGQISGFYVGRLMVRLTKSRDLFVSTSWKTMRQSPP"
BASE COUNT 334 a 354 c 416 g 265 t
ORIGIN
1 ggccgacagt gcctgatttg agatggggtc ccaggtctcg gtggaatcgg gagctctgca
61 cgtggtgatt gtgggtgggg gctttggcgg gatcgcagca gccagccagc tgcaggccct
121 gaacgtcccc ttcatgctgg tggacatgaa ggactccttc caccacaatg tggctgctct
181 ccgagcctcc gtggagacag ggttcgccaa aaagacattc atttcttact cggtgacttt
241 caaggacaac ttccggcagg ggctagtagt ggggatagac ctgaagaacc agatggtgct
301 gctgcagggt ggcgaggccc tgcccttctc tcatcttatc ctggccacgg gcagcactgg
361 gcccttcccg ggcaagttta atgaggtttc cagccagcag gccgctatcc aggcctatga
421 ggacatggtg aggcaggtcc agcgctcacg gttcatcgtg gtggtgggag gaggctcggc
481 tggagtggag atggcagcag agattaaaac agaatatcct gagaaagagg tcactctcat
541 tcactcccaa gtggccctgg ctgacaagga gctcctgccc tccgtccggc aggaagtgaa
601 ggagatcctc ctccggaagg gcgtgcagct gctgctgagt gagcgggtga gcaatctgga
661 ggagctgcct ctcaatgagt atcgagagta catcaaagtg cagacggaca aaggcacaga
721 ggtggccacc aacctggtga ttctctgcac cggcatcaag atcaacagct ccgcctaccg
781 caaagcattt gagagcagac tagccagcag tggtgctctg agagtgaacg agcacctcca
841 ggtggagggc cacagcaacg tctacgccat tggtgactgt gccgacgtga ggacgcccaa
901 gatggcctat cttgccggcc tccacgccaa catcgccgtg gccaacatcg tcaactctgt
961 gaagcagcgg cctctccagg cctacaagcc gggtgcactg acgttcctcc tgtccatggg
1021 gagaaatgac ggtgtgggcc aaatcagtgg cttctatgtg ggccggctca tggttcggct
1081 gaccaagagc cgggacctgt tcgtctctac gagctggaaa accatgaggc agtctccacc
1141 ttgatggaga ggccaggcgg gagaactacc gcagcaggtg ggcgtacgga ctgcttggcg
1201 catggcaccc gcctggcaag tgctagaact aatgctattc ttctggaata agatgccaat
1261 gatgtggtgg ctagaaatgc aacttgtata aaacaaaaat gggagagaga gaggtattaa
1321 acaaataccc cccttagagg ataaaaaaaa aaaaaaaaaa aaaaaaaaa
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