LOCUS BC006117 1404 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens L-2-hydroxyglutarate dehydrogenase, mRNA (cDNA clone
MGC:12994 IMAGE:3504996), complete cds.
ACCESSION BC006117
VERSION BC006117.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1404)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1404)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: d Column: 7.
FEATURES Location/Qualifiers
source 1..1404
/db_xref="H-InvDB:HIT000032617"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12994 IMAGE:3504996"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1404
/gene="L2HGDH"
/gene_synonym="FLJ12618"
/db_xref="GeneID:79944"
CDS 33..1358
/gene="L2HGDH"
/gene_synonym="FLJ12618"
/codon_start=1
/product="L2HGDH protein"
/protein_id="AAH06117.1"
/db_xref="GeneID:79944"
/translation="MVPALRYLVGACGRARGRFAGGSPGACGFASGRPRPLCGGSRSA
STSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKDLAVHQTGHNSGVIHSGIY
YKPESLKAKLCVQGAALLYEYCQQKGISYKQCGKLIVAVEQEEIPRLQALYEKGLQNG
VPGLRLIQQEDIKKKEPYCRGLMAIDCPHTGIVDYRQVALSFAQDFQEAGGSVLTNFE
VKGIEMAKESPSRSIDGMQYPIVIKNTKGEEIRCQYVVTCAGLYSDRISELSGCTPDP
RIVPFRGDYLLLKPEKCYLVKGNIYPVPDSRFPFLGVHFTPRMDGSIWLGPNAVLAFK
REGYRPFDFSATDVMDIIINSGLIKLASQNFSYGVTEMYKACFLGATVKYLQKFIPEI
TISDILRQVAVRGPSWLWQQPMKVSDNNIYCFLWRCFALLLTGSTCSFK"
BASE COUNT 387 a 266 c 368 g 383 t
ORIGIN
1 aattcgacac gaggggggag cgtgcgtagg ggatggtgcc agcgctgcgt tatttggttg
61 gtgcctgcgg acgggcccgc gggcgtttcg ccggtggctc ccctggggcg tgcgggttcg
121 cgtctgggag gccaagaccg ctgtgtggag gtagccgcag cgccagcacc agctcatttg
181 atatagtcat tgttggtggc ggaattgtgg ggcttgcctc tgccagagca ctcatcctgc
241 gacatccatc actttctatt ggtgttctgg aaaaggagaa agatttagct gttcaccaga
301 ctggacataa cagtggtgtc atacatagtg gaatttatta taaacctgag tctctgaaag
361 ccaaattatg tgtacaaggt gcagccctcc tctatgagta ctgtcagcaa aagggaattt
421 cctacaagca gtgtggcaag cttatagtag ctgttgaaca agaagaaatt cccagacttc
481 aggccctata tgagaaaggc ctccagaatg gtgtcccggg cctgaggctg atccagcagg
541 aggatataaa aaagaaggag ccatattgta ggggtctaat ggctattgat tgtccacata
601 ctggcattgt ggactatcgg caggtggctt tgtcatttgc ccaggatttc caagaagcag
661 gtggctctgt cttgaccaat tttgaagtaa aaggtattga aatggctaaa gaaagtcctt
721 caagaagtat agatggaatg caatatccaa ttgttataaa gaatacaaag ggagaggaaa
781 ttcgatgtca gtatgttgtg acatgtgcag gactttactc agaccgtatt tcagagttga
841 gtggctgcac tcctgatcct cgaattgtac cattccgggg agattacctg cttttgaagc
901 cagaaaaatg ttatcttgta aaaggaaata tttatccggt cccagatagc cggtttcctt
961 tcctaggagt tcacttcaca ccaaggatgg atggcagtat ttggctaggg cctaatgcag
1021 ttcttgcctt taaacgagag ggttacagac cctttgactt cagtgccaca gatgttatgg
1081 atataattat caatagtggc ttgattaaac tggcatccca gaatttttcc tatggagtta
1141 ctgaaatgta taaagcatgt tttcttggtg caacagtgaa gtatcttcaa aaattcatcc
1201 ctgaaattac tatcagtgat atacttaggc aggtggctgt gagaggaccg agctggctat
1261 ggcagcaacc catgaaagtg agtgataaca acatttattg tttcctgtgg cgttgctttg
1321 ctttgctatt gactggtagc acttgtagct ttaaataaat tgaggaagta tgagagagta
1381 aatggaaaaa aaaaaaaaaa aaaa
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