LOCUS BC006104 2495 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens RIO kinase 1 (yeast), mRNA (cDNA clone MGC:12903
IMAGE:3537086), complete cds.
ACCESSION BC006104
VERSION BC006104.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2495)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2495)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23510355.
FEATURES Location/Qualifiers
source 1..2495
/db_xref="H-InvDB:HIT000032606"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12903 IMAGE:3537086"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2495
/gene="RIOK1"
/gene_synonym="AD034"
/gene_synonym="bA288G3.1"
/gene_synonym="FLJ30006"
/gene_synonym="MGC12903"
/db_xref="GeneID:83732"
/db_xref="HGNC:HGNC:18656"
CDS 175..1881
/gene="RIOK1"
/gene_synonym="AD034"
/gene_synonym="bA288G3.1"
/gene_synonym="FLJ30006"
/gene_synonym="MGC12903"
/codon_start=1
/product="RIO kinase 1 (yeast)"
/protein_id="AAH06104.2"
/db_xref="GeneID:83732"
/db_xref="HGNC:HGNC:18656"
/translation="MDYRRLLMSRVVPGQFDDADSSDSENRDLKTVKEKDDILFEDLQ
DNVNENGEGEIEDEEEEGYDDDDDDWDWDEGVGKLAKGYVWNGGSNPQANRQTSDSSS
AKMSTPADKVLRKFENKINLDKLNVTDSVINKVTEKSRQKEADMYRIKDKADRATVEQ
VLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFK
DRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLV
MSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFNMLYHG
GGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVAVMTVRELFEFVTDPSITH
ENMDAYLSKAMEIASQRTKEERSSQDHVDEEVFKRAYIPRTLNEVKNYERDMDIIMKL
KEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQVEERTCSDSEDIGSSECSD
TDSEEQGDHARPKKHTTDPDIDKKERKKMVKEAQREKRKNKIPKHVKKRKEKTAKTKK
GK"
BASE COUNT 805 a 460 c 586 g 644 t
ORIGIN
1 gggtggtgga tctgtcggtc ccgttttccc gtcgcacgtg gtggccactg ttggcttctg
61 aatggtttgc aaggcggata tccacgccaa ggcctttgga tcggccgtgg gtacatccgt
121 ctgagccgtt cctttccatc gcagagcggc ggcctccggc ggcgctctcc agtcatggac
181 taccggcggc ttctcatgag ccgggtggtc cccgggcaat tcgacgacgc ggactcctct
241 gacagtgaaa acagagactt gaagacagtc aaagagaagg atgacattct gtttgaagac
301 cttcaagaca atgtgaatga gaatggtgaa ggtgaaatag aagatgagga ggaggagggt
361 tatgatgatg atgatgatga ctgggactgg gatgaaggag ttggaaaact cgccaagggt
421 tatgtctgga atggaggaag caacccacag gcaaatcgac agacctccga cagcagttca
481 gccaaaatgt ctactccagc agacaaggtc ttacggaaat ttgagaataa aattaattta
541 gataagctaa atgttactga ttccgtcata aataaagtca ccgaaaagtc tagacaaaag
601 gaagcagata tgtatcgcat caaagataag gcagacagag caactgtaga acaggtgttg
661 gatcccagaa caagaatgat tttattcaag atgttgacta gaggaatcat aacagagata
721 aatggctgca ttagcacagg aaaagaagct aatgtatacc atgctagcac agcaaatgga
781 gagagcagag caatcaaaat ttataaaact tctattttgg tgttcaaaga tcgggataaa
841 tatgtaagtg gagaattcag atttcgtcat ggctattgta aaggaaaccc taggaaaatg
901 gtgaaaactt gggcagaaaa agaaatgagg aacttaatca ggctaaacac agcagagata
961 ccatgtccag aaccaataat gctaagaagt catgttcttg tcatgagttt catcggtaaa
1021 gatgacatgc ctgcaccact cttgaaaaat gtccagttat cagaatccaa ggctcgggag
1081 ttgtacctgc aggtcattca gtacatgaga agaatgtatc aggatgccag acttgtccat
1141 gcagatctca gtgaatttaa catgctgtac cacggtggag gcgtgtatat cattgacgtg
1201 tctcagtccg tggagcacga ccacccacat gccttggagt tcttgagaaa ggattgcgcc
1261 aacgtcaatg atttctttat gaggcacagt gttgctgtca tgactgtgcg ggagctcttt
1321 gaatttgtca cagatccatc cattacacat gagaacatgg atgcttatct ctcaaaggcc
1381 atggaaatag catctcaaag gaccaaggaa gaacggtcta gccaagatca tgtggatgaa
1441 gaggtgttta agcgagcata tattcctaga accttgaatg aagtgaaaaa ttatgagagg
1501 gatatggaca taattatgaa attgaaggaa gaggacatgg ccatgaatgc ccaacaagat
1561 aatattctat accagactgt tacaggattg aagaaagatt tgtcaggagt tcagaaggtc
1621 cctgcactcc tagaaaatca agtggaggaa aggacttgtt ctgattcaga agatattgga
1681 agctctgagt gctctgacac agactctgaa gagcagggag accatgcccg ccccaagaaa
1741 cacaccacgg accctgacat tgataaaaaa gaaagaaaaa agatggtcaa ggaagcccag
1801 agagagaaaa gaaaaaacaa aattcctaaa catgtgaaaa aaagaaagga gaagacagcc
1861 aagacgaaaa aaggcaaata gaatgagaac catattatgt acagtcattt tcctcagttc
1921 cttttctcgc ctgaactctt aagctgcatc tggaagatgg cttattggtt ttaaccagat
1981 tgtcatcgtg gcactgtctg tgaagacgga ttcaaatgtt ttcatgtaac tatgtaaaaa
2041 gctctaagct ctagagtcta gatccagtca ctgactctgt ctggtgttga cagaggattt
2101 atttaagcta ttattttaat aaagaacttt gtacattttt atttttatat ttttttctct
2161 tacaaatatg tttttggaag catgataaat gtttaaatgt agtcaacatc tgtaactctt
2221 acatgagtgt ccagaggcac tcatgggaaa attggttttg ctttctttgt acacaccaga
2281 gacccatctg aggtcatctg attataaggc catgtttata taaagggaat ttcacccaca
2341 gttcagctgg ctgttgattt tcactgcaac tctgcctttg tgtgtattgg cgatcatttg
2401 taatgctctt acacttcgtc tttaatgttc tttttggagt taggacctct cagttcataa
2461 agttttttac aattcaaaaa aaaaaaaaaa aaaaa
//