LOCUS BC006101 1776 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens POU class 2 homeobox 2, mRNA (cDNA clone MGC:12814
IMAGE:3688152), complete cds.
ACCESSION BC006101
VERSION BC006101.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1776)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1776)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505958.
FEATURES Location/Qualifiers
source 1..1776
/db_xref="H-InvDB:HIT000032604"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12814 IMAGE:3688152"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1776
/gene="POU2F2"
/gene_synonym="Oct-2"
/gene_synonym="OCT2"
/db_xref="GeneID:5452"
/db_xref="HGNC:HGNC:9213"
/db_xref="MIM:164176"
CDS 55..1257
/gene="POU2F2"
/gene_synonym="Oct-2"
/gene_synonym="OCT2"
/codon_start=1
/product="POU2F2 protein"
/protein_id="AAH06101.1"
/db_xref="GeneID:5452"
/db_xref="HGNC:HGNC:9213"
/db_xref="MIM:164176"
/translation="MVHSSMGAPEIRMSKPLEAEKQGLDSPSEHTDTERNGPDTNHQN
PQNKTSPFSVSPTGPSTKIKAEDPSGDSAPAAPLPPQPAQPHLPQAQLMLTGSQLAGD
IQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQP
RAGLPTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGN
DFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDG
LPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQ
KEKRINPCSAAPMLPSPGKPASYSPHMVTPQGGAGTLPLSQASSSLSTTAQTPALKAA
TRLSACQA"
BASE COUNT 407 a 617 c 476 g 276 t
ORIGIN
1 gagagggtgg ggagatgaca cagttgttcc cccagccctg gcggggcggg cagcatggtt
61 cactccagca tgggggctcc agaaataaga atgtctaagc ccctggaggc cgagaagcaa
121 ggtctggact ccccatcaga gcacacagac accgaaagaa atggaccaga cactaatcat
181 cagaaccccc aaaataagac ctccccattc tccgtgtccc caactggccc cagtacaaag
241 atcaaggctg aagaccccag tggcgattca gccccagcag cacccctgcc ccctcagccg
301 gcccagcctc atctgcccca ggcccaactc atgttgacgg gcagccagct agctggggac
361 atacagcagc tcctccagct ccagcagctg gtgcttgtgc caggccacca cctccagcca
421 cctgctcagt tcctgctacc gcaggcccag cagagccagc caggcctgct accgacacca
481 aatctattcc agctacctca gcaaacccag ggagctcttc tgacctccca gccccgggcc
541 gggcttccca cacagccccc caaatgcttg gagccaccat cccaccccga ggagcccagt
601 gatctggagg agctggagca attcgcccgc accttcaagc aacgccgcat caagctgggc
661 ttcacgcagg gtgatgtggg cctggccatg ggcaagctct acggcaacga cttcagccag
721 acgaccattt cccgcttcga ggccctcaac ctgagcttca agaacatgtg caaactcaag
781 cccctcctgg agaagtggct caacgatgca gagactatgt ctgtggactc aagcctgccc
841 agccccaacc agctgagcag ccccagcctg ggtttcgacg gcctgcccgg ccggagacgc
901 aagaagagga ccagcatcga gacaaacgtc cgcttcgcct tagagaagag ttttctagcg
961 aaccagaagc ctacctcaga ggagatcctg ctgatcgccg agcagctgca catggagaag
1021 gaagtgatcc gcgtctggtt ctgcaaccgg cgccagaagg agaaacgcat caacccctgc
1081 agtgcggccc ccatgctgcc cagcccaggg aagccggcca gctacagccc ccatatggtc
1141 acaccccaag ggggcgcggg gaccttaccg ttgtcccaag cttccagcag tctgagcaca
1201 acagcacaaa ccccagccct caaggcagcc actcggctat cggcttgtca ggcctgaacc
1261 ccagcacggg ccctggcctc tggtggaacc ctgcccctta ccagccttga tggcagcggg
1321 aatctggtgc tgggggcagc cggtgcagcc ccggggagcc ctggcctggt gacctcgccg
1381 ctcttcttga atcatgctgg gctgcccctg ctcagcaccc cgcctggtgt gggcctggtc
1441 tcagcagcgg ctgcggctgt ggcagcctcc atctccagca agtctcctgg cctctcctcc
1501 tcatcctctt catcctcatc ctcctcctcc tccacttgca gcgagacggc agcacagacc
1561 cctggaggtc caggggggcc cgaggcaggg tccaaacctg agtgagggcc agccatgcct
1621 cccctcccat tcctctggtc cctgccttgg tcccttgcct gggaagaggg cgaggaggcc
1681 agtggtgggg acgcagaggg tcctcagagc aggagtgaca agggaggaaa gaccaaaaaa
1741 acaaccaacc aaaaaaaaaa aaaaaaaaaa aaaaaa
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