LOCUS BC006078 2485 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens ubiquitin interaction motif containing 1, mRNA (cDNA
clone MGC:12552 IMAGE:3659756), complete cds.
ACCESSION BC006078
VERSION BC006078.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2485)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2485)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476129.
FEATURES Location/Qualifiers
source 1..2485
/db_xref="H-InvDB:HIT000086586"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12552 IMAGE:3659756"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2485
/gene="UIMC1"
/gene_synonym="RAP80"
/gene_synonym="X2HRIP110"
/db_xref="GeneID:51720"
/db_xref="HGNC:HGNC:30298"
/db_xref="MIM:609433"
CDS 75..1232
/gene="UIMC1"
/gene_synonym="RAP80"
/gene_synonym="X2HRIP110"
/codon_start=1
/product="UIMC1 protein"
/protein_id="AAH06078.1"
/db_xref="GeneID:51720"
/db_xref="HGNC:HGNC:30298"
/db_xref="MIM:609433"
/translation="MPRRKKKVKEVSESRNLEKKDVETTSSVSVKRKRRLEDAFIVIS
DSDGEEPKEENGLQKTKTKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQ
EEEEEELLRKAIAESLNSCRPSDASATRSRPLATGPSSQSHQEKTTDSGLTEGIWQLV
PPSLFKGSHISQGNEAEEREEPWDHTKKTEEEPVSGSSGSWDQSSQPVFENVNVKSFD
RCTGHSAEHTQCGKPQESTGRGSAFLKAVQGSGDTSRHCLPTLADAKGLQDTGGTVNY
FWGIPFCPDGVDPNQYTKVILCQLEVYQKSLKMAQRQLLNKKGFGEPVLPRPPSLIQN
ECGQGEQASEKNECISEDMGDEDKEERQESRASDWHSKTKDFQESSIKSLK"
BASE COUNT 774 a 512 c 650 g 549 t
ORIGIN
1 caacgtgtgg cggctcgcga cccccggcaa cccggagaag gtctacagag cggcctgcgc
61 cagcgaacaa aaggatgcca cggagaaaga aaaaagttaa agaagtctcc gaatctcgga
121 acctggagaa gaaggatgtg gaaactacca gttctgtcag tgtgaagagg aagcgtagac
181 ttgaggatgc attcattgtg atatccgata gtgatggaga ggaaccaaag gaggaaaatg
241 ggttgcagaa aacgaagaca aaacagtcga atagagcaaa gtgtttggcc aaaagaaaaa
301 tcgcacagat gacagaagaa gaacagtttg ctctggctct caaaatgagt gagcaggaag
361 ctagggaggt gaacagccag gaggaggaag aagaggagct cttgaggaaa gccattgctg
421 aaagcctgaa tagttgccgg ccttctgatg cttccgctac cagatctcga cctctggcca
481 ctggaccgtc ttcccagtcc catcaagaga aaaccacaga ctctgggctc actgaaggca
541 tatggcagct ggtacctcca tcactgttta aaggctcaca tatcagtcag ggaaacgagg
601 ctgaggaaag agaggagcct tgggaccaca ctaaaaaaac tgaagaggag ccggtctctg
661 gcagctcagg aagctgggac cagtcaagcc agccagtgtt tgagaatgtg aacgttaaat
721 cttttgacag atgtactggc cactcggctg agcacacaca gtgtgggaag ccacaggaaa
781 gtactgggag gggttctgct tttctcaaag ctgtccaggg tagcggggac acatctaggc
841 actgtctacc taccctagca gatgccaaag gtctccagga cactgggggc actgtgaact
901 atttctgggg tattccattc tgccctgatg gagtagaccc taaccagtat accaaggtca
961 ttctctgcca gttggaggtt tatcaaaaga gcctgaaaat ggctcagagg cagctcctta
1021 ataaaaaagg ttttggggaa ccagtgttac ctagacctcc ttctctgatc cagaatgaat
1081 gtggccaagg agagcaggct agtgagaaaa atgaatgcat ctcagaagat atgggagatg
1141 aagacaaaga ggagaggcag gagtctaggg catctgactg gcactcaaaa accaaggatt
1201 tccaggaaag ctcaattaaa agcttgaaat agaaactttt gttggaggaa gaaccaacaa
1261 ccagtcatgg tcagtcttcc caagggattg ttgaagaaac ttctgaagag ggaaactctg
1321 tacctgcttc acaaagtgtt gctgctttga ccagtaagag aagcttagtc cttatgccag
1381 agagttctgc agaagaaatc actgtttgtc ctgagaccca gctaagttcc tctgaaactt
1441 ttgaccttga aagagaagtc tctccaggta gcagagatat cttggatgga gtcagaataa
1501 taatggcaga taaggaggtt ggtaacaagg aagatgctga gaaggaagta gctatttcta
1561 ccttctcatc cagtaaccag gtatcctgcc cgctatgtga ccaatgcttt ccacccacaa
1621 agattgaacg acatgccatg tactgcaatg gtctgatgga ggaagataca gtattgactc
1681 ggagacaaaa agaggccaag accaagagtg acagtgggac agctgcccag acttctctag
1741 acattgacaa gaatgagaag tgttacctct gtaaatccct ggtcccattt agagagtatc
1801 agtgtcatgt ggactcctgt ctccagcttg caaaggctga ccaaggagat ggacctgaag
1861 ggagtggaag agcatgttca actgtggagg ggaagtggca gcagaggctg aagaacccaa
1921 aggaaaaagg ccacagtgaa ggccgactcc ttagtttctt ggaacagtct gagcacaaga
1981 cttcagatgc agacatcaag tcttcagaaa caggagcctt cagggtgcct tcaccaggga
2041 tggaagaggc aggctgcagc agagagatgc agagttcttt cacacgtcgt gacttaaatg
2101 aatctcccgt caagtctttt gtttccattt cagaagccac agattgctta gtggacttta
2161 aaaagcaagt tactgtccag ccaggtagtc ggacacggac caaagctggc agaggaagaa
2221 ggagaaaatt ctgaatttct agggtccaaa agttgacaaa accattagta ggaggggtgg
2281 gccatgttca ttaagccata gtggtcccta gttcattgtt gagcaagttt tagccctgca
2341 gttttcacca ccagcaccta cccagcattc tggtttttat gttttttatg atctatgcag
2401 acaactgtgt attctgtttt ataacagttt gtttgaattt acttacagtt aaaaaattta
2461 aatataaaaa aaaaaaaaaa aaaaa
//