LOCUS BC006012 1443 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens selenoprotein T, mRNA (cDNA clone MGC:14845
IMAGE:4333083), complete cds.
ACCESSION BC006012
VERSION BC006012.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1443)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: p Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42789379.
FEATURES Location/Qualifiers
source 1..1443
/db_xref="H-InvDB:HIT000086582"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14845 IMAGE:4333083"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1443
/gene="SELT"
/db_xref="GeneID:51714"
/db_xref="MIM:607912"
CDS 76..663
/gene="SELT"
/codon_start=1
/transl_except=(pos:220..222,aa:Sec)
/product="selenoprotein T"
/protein_id="AAH06012.2"
/db_xref="GeneID:51714"
/db_xref="MIM:607912"
/translation="MRLLLLLLVAASAMVRSEASANLGGVPSKRLKMQYATGPLLKFQ
ICVSUGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLIGLIIV
GKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWS
KLESGHLPSMQQLVQILDNEMKLNVHMDSIPHHRS"
BASE COUNT 418 a 271 c 307 g 447 t
ORIGIN
1 gggagcagct cgctcctggg ctttgggctg gctgcagtct gtctgagggc ggccgaagtg
61 gctggctcat ttaagatgag gcttctgctg cttctcctag tggcggcgtc tgcgatggtc
121 cggagcgagg cctcggccaa tctgggcggc gtgcccagca agagattaaa gatgcagtac
181 gccacggggc cgctgctcaa gttccagatt tgtgtttcct gaggttatag gcgggtgttt
241 gaggagtaca tgcgggttat tagccagcgg tacccagaca tccgcattga aggagagaat
301 tacctccctc aaccaatata tagacacata gcatctttcc tgtcagtctt caaactagta
361 ttaataggct taataattgt tggcaaggat ccttttgctt tctttggcat gcaagctcct
421 agcatctggc agtggggcca agaaaataag gtttatgcat gtatgatggt tttcttcttg
481 agcaacatga ttgagaacca gtgtatgtca acaggtgcat ttgagataac tttaaatgat
541 gtacctgtgt ggtctaagct ggaatctggt caccttccat ccatgcaaca acttgttcaa
601 attcttgaca atgaaatgaa gctcaatgtg catatggatt caatcccaca ccatcgatca
661 tagcaccacc tatcagcact gaaaactctt ttgcattaag ggatcattgc aagagcagcg
721 tgactgacat tatgaaggcc tgtactgaag acagcaagct gttagtacag accagatgct
781 ttcttggcag gctcgttgta cctcttggaa aacctcaatg caagatagtg tttcagtgct
841 ggcatatttt ggaattctgc acattcatgg agtgcaataa tactgtatag ctttccccac
901 ctcccacaaa atcacccagt taatgtgtgt gtgtgtgttt tttttaaggt aaacattact
961 acttgtaact ttttttctta gtcatatttg aaaaagtaga aaattgagtt acaatttgat
1021 tttttttcca aagatgtctg ttaaatctgt tgtgctttta tatgaatatt tgttttttat
1081 agtttaaaat tgatcctttg ggaatccagt tgaagttccc aaatacttta taagagttta
1141 tcagacatct ctaatttggc catgtccagt ttatacagtt tacaaaatat agcagatgca
1201 agattatggg ggaaatccta tattcagagt actctataaa tttttgtgta tgtgtgtatg
1261 tgcgtgtgat taccagagaa ctactaaaaa aaccaactgc ttttttaaat cctattgtgt
1321 agttaaagtg tcatgccttg accaatctaa tgaattgatt aattaactgg gcctttatac
1381 ttaactaaat aaaaaactaa gcagatatga gccaaaaaaa aaaaaaaaaa aaaaaaaaaa
1441 aaa
//