LOCUS BC006005 667 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens unconventional SNARE in the ER 1 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:14828 IMAGE:4279653), complete
cds.
ACCESSION BC006005
VERSION BC006005.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 667)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 667)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49574516.
FEATURES Location/Qualifiers
source 1..667
/db_xref="H-InvDB:HIT000032584"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14828 IMAGE:4279653"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..667
/gene="USE1"
/gene_synonym="MDS032"
/gene_synonym="p31"
/gene_synonym="SLT1"
/db_xref="GeneID:55850"
/db_xref="HGNC:HGNC:30882"
/db_xref="MIM:610675"
CDS 17..457
/gene="USE1"
/gene_synonym="MDS032"
/gene_synonym="p31"
/gene_synonym="SLT1"
/codon_start=1
/product="USE1 protein"
/protein_id="AAH06005.1"
/db_xref="GeneID:55850"
/db_xref="HGNC:HGNC:30882"
/db_xref="MIM:610675"
/translation="MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGVLEDMLQ
ALKVHASKPASEVINEYSWKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTARER
VPATKTVHLQSRARYTSEMRSELLGTDSAEPEMDVRKRTPCHTH"
BASE COUNT 189 a 175 c 193 g 110 t
ORIGIN
1 gtagggccgg gcgataatgg cggcgtcgag gctggagcta aacctggtgc ggctgctatc
61 ccgctgcgag gcgatggcag cggagaaacg ggacccggac gagtggcgcc tggagaagta
121 cgtgggagtc ctagaggaca tgttgcaggc cctgaaggtc cacgcgagca aaccggcctc
181 tgaggtgatc aatgaatatt cctggaaggt ggattttctg aaggggatgc tgcaagccga
241 gaagctgacc tcctcctcag agaaagcact ggccaaccag ttcctggccc ctggccgtgt
301 gccaaccaca gccagagagc gagtgcccgc cacaaagacg gtgcatctgc agtcacgggc
361 gcggtacacc agcgagatgc ggagtgagct actaggcacg gactctgcag agcctgagat
421 ggacgtaagg aagagaacac cctgtcacac tcactgaaaa tggcggacca gaacctggag
481 aaactgaaga cggagtcaga gcgtctggag cagcacacgc agaagtcagt caactggctg
541 ctctgggcca tgctcattat cgtctgcttc atcttcatta gcatgatcct cttcattcga
601 atcatgccta aactcaaata aagacccccg cccacctaaa aaaaaaaaaa aaaaaaaaaa
661 aaaaaaa
//