LOCUS BC005985 973 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA
clone MGC:14752 IMAGE:4282114), complete cds.
ACCESSION BC005985
VERSION BC005985.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 973)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 973)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27374999.
FEATURES Location/Qualifiers
source 1..973
/db_xref="H-InvDB:HIT000032573"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14752 IMAGE:4282114"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..973
/gene="GABARAPL2"
/gene_synonym="GEF-2"
/gene_synonym="GEF2"
/db_xref="GeneID:11345"
/db_xref="HGNC:HGNC:13291"
/db_xref="MIM:607452"
CDS 78..431
/gene="GABARAPL2"
/gene_synonym="GEF-2"
/gene_synonym="GEF2"
/codon_start=1
/product="GABA(A) receptor-associated protein-like 2"
/protein_id="AAH05985.1"
/db_xref="GeneID:11345"
/db_xref="HGNC:HGNC:13291"
/db_xref="MIM:607452"
/translation="MKWMFKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDI
DKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDED
GFLYVAYSGENTFGF"
BASE COUNT 277 a 185 c 218 g 293 t
ORIGIN
1 gccgtcgttg ttgttgtgct cggtgcgctg agctccgcgg ctccgcgagc cggttccgtc
61 cccttcccgc cgccgccatg aagtggatgt tcaaggagga ccactcgctg gaacacagat
121 gcgtggagtc cgcgaagatt cgagcgaaat atcccgacag ggttccggtg attgtggaaa
181 aggtctcagg ctctcagatt gttgacattg acaaacggaa gtacttggtt ccatctgata
241 tcactgtggc tcagttcatg tggatcatca ggaaaaggat ccagcttcct tctgaaaagg
301 cgatcttcct gtttgtggat aagacagtcc cacagtccag cctaactatg ggacagcttt
361 acgagaagga aaaagatgaa gatggattct tatatgtggc ctacagcgga gagaacactt
421 ttggcttctg agggccattg ctgggctagg tgcaccgtaa ctgcttgtgt atcttgtaaa
481 tagccagcca ttttcagtta ttataccaga acctcttcac atagacctat tagtgcattt
541 gtaactggat ttatttctta atatattgga aggttttgtt tccttagact agtaaattat
601 catacagagt tttattttga gtttttcttt ttgtgcattg tcctcatgcc tgtattctcc
661 aggaaacttg tccttctgga aatcatattg aatgatattt ctatatcgaa gtgaggtagg
721 tgcggtatta aagtgaaagg gaaggtgatg catttattct gggttatgct tgaagtgtta
781 gatggctaag tattaaaatt atccaaatta aatccttagc agtcagaaca cttgcttcac
841 tagaatatgc caactgccaa tcatgttgga ctgagctaat ttgttcctct ttctgaaact
901 attaaggtaa ataattaaca ataaaaattc tcttataaag gcgaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaa
//