LOCUS BC005958 1128 bp mRNA linear HUM 27-JAN-2004
DEFINITION Homo sapiens coiled-coil domain containing 5 (spindle associated),
mRNA (cDNA clone MGC:14606 IMAGE:4047707), complete cds.
ACCESSION BC005958
VERSION BC005958.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1128)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1128
/db_xref="H-InvDB:HIT000050457"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14606 IMAGE:4047707"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1128
/gene="CCDC5"
/gene_synonym="HEI-C"
/gene_synonym="HsT1461"
/db_xref="GeneID:115106"
CDS 285..893
/gene="CCDC5"
/gene_synonym="HEI-C"
/gene_synonym="HsT1461"
/codon_start=1
/product="CCDC5 protein"
/protein_id="AAH05958.1"
/db_xref="GeneID:115106"
/translation="MESVNFSPANLSSTGSRYLNALVDSAVALETKDTSLASFIPAVN
DLTSDLFRTKSKSEEIKIELEKLEKNLTATLVLEKCLQEDVKKAELHLSTERAKVDNR
RQNMDFLKAKSEEFRFGIKAAEEQLSARGMDASLSHQSLVALSEKLARLKQQTIPLKK
KLESYLDLMPNPSLAQVKIEEAKRELDSIEAELTRRVDMMEL"
BASE COUNT 394 a 206 c 238 g 290 t
ORIGIN
1 ggcgggagcc gcagctatgg agccgcagga ggagagagaa acgcaggttg ctgcgtggtt
61 aaaaaaaata tttggagatc atcctattcc acagtatgag gtgaacccac ggaccacaga
121 gattttacat cacctttcag aacgcaacag ggtccgggac agggatgtct acctggtaat
181 agaggacttg aagcagaaag caagtgaata cgagtcagaa ggtgagatta agtccagagt
241 tttgaacgag aataaataga gccaagtatc ttcaagacct tctcatggag agtgtgaatt
301 tttcccccgc caatctctct agcactggtt ccaggtatct gaatgctttg gttgacagtg
361 cggtggccct tgaaacaaag gatacctcgc tagctagttt tatccctgca gtgaatgatt
421 tgacctctga tctctttcgt accaaatcca aaagtgaaga aatcaagatt gaactggaaa
481 aacttgaaaa aaatttaact gcaactttag tattagaaaa atgtctacaa gaggatgtca
541 agaaagcaga gttgcatctg tctacagaaa gggccaaagt tgataatcgt cgtcagaaca
601 tggactttct aaaagcaaag tcagaggaat tcagatttgg aatcaaggct gcagaggagc
661 aactttcagc cagaggcatg gatgcttctc tgtctcatca gtccttagta gcactatcag
721 agaaactggc aagattaaag caacagacta tacctttgaa gaaaaaattg gagtcctatt
781 tagacttaat gccgaatccg tctcttgctc aagtgaaaat tgaagaagca aagcgagaac
841 tagatagcat tgaagctgaa cttacaagaa gagtagacat gatggaactg tgacaaaagc
901 caaataaaca tccttttccc taacaaagta aattgaatag gactttacag agttcttttt
961 cctcttggca tttcctaata acaaaacttt ctgtgttctt agattacaga atatcataat
1021 tgatagaata tggtttctta ctgtgtgttg catttttgtg cccaaataca tagttttcat
1081 attaaaaagc cttttcccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//