LOCUS BC005946 1582 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:14580
IMAGE:4134187), complete cds.
ACCESSION BC005946
VERSION BC005946.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1582)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1582)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1582
/db_xref="H-InvDB:HIT000032545"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14580 IMAGE:4134187"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1582
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 101..1450
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH05946.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 369 a 426 c 390 g 397 t
ORIGIN
1 actacttctc ccccggactc cttggtagtc tgttagtggg agatccttgt tgccgtccct
61 tcgcctcctt caccgccgca gaccccttca agttctagtc atgcgtgagt gcatctccat
121 ccacgttggc caggctggtg tccagattgg caatgcctgc tgggagctct actgcctgga
181 acacggcatc cagcccgatg gccagatgcc aagtgacaag accattgggg gaggagatga
241 ttccttcaac accttcttca gtgaaacggg tgctggcaag catgtgcccc gggcagtgtt
301 tgtagacttg gaacccacag tcattgatga agttcgcact ggcacttacc gccagctctt
361 ccaccctgag caactcatca caggcaagga agatgctgcc aataactatg cccgagggca
421 ctacaccatt ggcaaggaga tcattgacct cgtgttggac cgaattcgca agctggctga
481 ccagtgcacc ggtcttcagg gcttcttggt tttccacagc tttggtgggg gaactggttc
541 tgggttcacc tcgctgctca tggaacgtct ctcagttgat tatggcaaga agtccaagct
601 ggagttctcc atttacccgg cgccccaggt ttccacagct gtagttgagc cctacaactc
661 catcctcacc acccacacca ccctggagca ctctgattgt gccttcatgg tagacaatga
721 ggccatctat gacatctgtc gtagaaacct cgatatcgag cgcccaacct acactaacct
781 taaccgcctt attagccaga ttgtgtcctc catcactgct tccctgagat ttgatggagc
841 cctgaatgtt gacctgacag aattccagac caacctggtg ccctaccccc gcatccactt
901 ccctctggcc acatatgccc ctgtcatctc tgctgagaaa gcctaccatg aacagcttac
961 tgtagcagag atcaccaatg cttgctttga gccagccaac cagatggtga aatgtgaccc
1021 tcgccatggt aaatacatgg cttgctgcct gttataccgt ggtgacgtgg ttcccaaaga
1081 tgtcaatgct gccattgcca ccatcaaaac caagcgtacc atccagtttg tggattggtg
1141 ccccactggc ttcaaggttg gcattaatta ccagcctccc actgtggtgc ctggcggaga
1201 cctggccaag gtacagagag ctgtgtgcat gctgagcaat accacagctg ttgccgaggc
1261 ctgggctcgc ctggaccaca agtttgacct gatgtatgcc aagcgtgcct ttgttcactg
1321 gtacgtgggt gaggggatgg aggaaggcga gttttcagag gcccgtgagg acatggctgc
1381 ccttgagaag gattatgagg aggttggagc agatagtgct gacggagagg atgagggtga
1441 agagtattaa cctgtgtgct gtacttttac actcctttgt cttggaactg tcttattttt
1501 gttctgtaaa tgtctattgc cgtaaattgt taataaaatt gatgtttcca tttcaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aa
//