LOCUS BC005930 907 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens CD58 molecule, mRNA (cDNA clone MGC:14538
IMAGE:4285827), complete cds.
ACCESSION BC005930
VERSION BC005930.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 907)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 907)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: n Column: 8.
FEATURES Location/Qualifiers
source 1..907
/db_xref="H-InvDB:HIT000032530"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14538 IMAGE:4285827"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..907
/gene="CD58"
/gene_synonym="LFA-3"
/db_xref="GeneID:965"
/db_xref="HGNC:HGNC:1688"
/db_xref="MIM:153420"
CDS 68..790
/gene="CD58"
/gene_synonym="LFA-3"
/codon_start=1
/product="CD58 protein"
/protein_id="AAH05930.1"
/db_xref="GeneID:965"
/db_xref="HGNC:HGNC:1688"
/db_xref="MIM:153420"
/translation="MVAGSDAGRALGVLSVVCLLHCFGFISCFSQQIYGVVYGNVTFH
VPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDE
YEMESPNITDTMKFFLYVLESLPSPTLTCALTNGSIEVQCMIPEYYNSHRGLIMYSWD
CPMEQCKRNSTSIYFKMENDLPQKIQCTLSNPLFNTTSSIILTTCIPSSGHSRHRYAL
IPIPLAVITTCIVLYMNGMYAF"
BASE COUNT 297 a 168 c 183 g 259 t
ORIGIN
1 gtaggcggtg cttgaactta gggctgcttg tggctgggca ctcgcgcaga ggccggcccg
61 acgagccatg gttgctggga gcgacgcggg gcgggccctg ggggtcctca gcgtggtctg
121 cctgctgcac tgctttggtt tcatcagctg tttttcccaa caaatatatg gtgttgtgta
181 tgggaatgta actttccatg taccaagcaa tgtgccttta aaagaggtcc tatggaaaaa
241 acaaaaggat aaagttgcag aactggaaaa ttctgaattc agagctttct catcttttaa
301 aaatagggtt tatttagaca ctgtgtcagg tagcctcact atctacaact taacatcatc
361 agatgaagat gagtatgaaa tggaatcgcc aaatattact gataccatga agttctttct
421 ttatgtgctt gagtctcttc catctcccac actaacttgt gcattgacta atggaagcat
481 tgaagtccaa tgcatgatac cagagtatta caacagccat cgaggactta taatgtactc
541 atgggattgt cctatggagc aatgtaaacg taactcaacc agtatatatt ttaagatgga
601 aaatgatctt ccacaaaaaa tacagtgtac tcttagcaat ccattattta atacaacatc
661 atcaatcatt ttgacaacct gtatcccaag cagcggtcat tcaagacaca gatatgcact
721 tatacccata ccattagcag taattacaac atgtattgtg ctgtatatga atggtatgta
781 tgctttttaa aacaaaatag tttgaaaact tgcattgttt tccaaaggtc agaaaatagt
841 ttaaggatga aaataaagtt tgaaatttta gacattcgaa aaaaaaaaaa aaaaagaaaa
901 aaaaaaa
//