LOCUS BC005916 1300 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens pleiotrophin, mRNA (cDNA clone MGC:14512
IMAGE:4248708), complete cds.
ACCESSION BC005916
VERSION BC005916.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1300)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1300)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476152.
FEATURES Location/Qualifiers
source 1..1300
/db_xref="H-InvDB:HIT000032519"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14512 IMAGE:4248708"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1300
/gene="PTN"
/gene_synonym="HARP"
/gene_synonym="HBGF8"
/gene_synonym="HBNF"
/db_xref="GeneID:5764"
/db_xref="HGNC:HGNC:9630"
/db_xref="MIM:162095"
CDS 352..858
/gene="PTN"
/gene_synonym="HARP"
/gene_synonym="HBGF8"
/gene_synonym="HBNF"
/codon_start=1
/product="pleiotrophin"
/protein_id="AAH05916.1"
/db_xref="GeneID:5764"
/db_xref="HGNC:HGNC:9630"
/db_xref="MIM:162095"
/translation="MQAQQYQQQRRKFAAAFLAFIFILAAVDTAEAGKKEKPEKKVKK
SDCGEWQWSVCVPTSGDCGLGTREGTRTGAECKQTMKTQRCKIPCNWKKQFGAECKYQ
FQAWGECDLNTALKTRTGSLKRALHNAECQKTVTISKPCGKLTKPKPQAESKKKKKEG
KKQEKMLD"
BASE COUNT 431 a 281 c 300 g 288 t
ORIGIN
1 ctctccctcc ctcgcccagc cttcgtcctc ctggcccgct cctctcatcc ctcccattct
61 ccatttccct tccgttccct ccctgtcagg gcgtaattga gtcaaaggca ggatcaggtt
121 ccccgccttc cagtccaaaa atcccgccaa gagagcccca gagcagagga aaatccaaag
181 tggagagagg ggaagaaaga gaccagtgag tcatccgtcc agaaggcggg gagagcagca
241 gcggcccaag caggagctgc agcgagccgg gtacctggac tcagcggtag caacctcgcc
301 ccttgcaaca aaggcagact gagcgccaga gaggacgttt ccaactcaaa aatgcaggct
361 caacagtacc agcagcagcg tcgaaaattt gcagctgcct tcttggcatt cattttcata
421 ctggcagctg tggatactgc tgaagcaggg aagaaagaga aaccagaaaa aaaagtgaag
481 aagtctgact gtggagaatg gcagtggagt gtgtgtgtgc ccaccagtgg agactgtggg
541 ctgggcacac gggagggcac tcggactgga gctgagtgca agcaaaccat gaagacccag
601 agatgtaaga tcccctgcaa ctggaagaag caatttggcg cggagtgcaa ataccagttc
661 caggcctggg gagaatgtga cctgaacaca gccctgaaga ccagaactgg aagtctgaag
721 cgagccctgc acaatgccga atgccagaag actgtcacca tctccaagcc ctgtggcaaa
781 ctgaccaagc ccaaacctca agcagaatct aagaagaaga aaaaggaagg caagaaacag
841 gagaagatgc tggattaaaa gatgtcacct gtggaacata aaaaggacat cagcaaacag
901 gatcagttaa ctattgcatt tatatgtacc gtaggctttg tattcaaaaa ttatctatag
961 ctaagtacac aataagcaaa aacaaaaaga aaagaaaatt tttgtagtag cgttttttaa
1021 atgtatacta tagtaccagt aggggcttat aataaaggac tgtaatctta tttaggaagt
1081 tgacttatag tacatgataa atgatagaca attgaggtaa gttttttgaa attatgtgac
1141 attttacatt aaattttttt tacatttttt gggcagcaat ttaaatgtta tgactatgta
1201 aactacttct cttgttaggt aatttttttc acctagattt ttttcccaat tgagaaaaat
1261 atatactaaa caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//