LOCUS BC005816 1816 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens deltex homolog 1 (Drosophila), mRNA (cDNA clone
IMAGE:3688330), partial cds.
ACCESSION BC005816
VERSION BC005816.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1816)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1816)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC005816.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: m Column: 15.
FEATURES Location/Qualifiers
source 1..1816
/db_xref="H-InvDB:HIT000086530"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3688330"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1816
/gene="DTX1"
/db_xref="GeneID:1840"
/db_xref="MIM:602582"
CDS <1..678
/gene="DTX1"
/codon_start=1
/product="DTX1 protein"
/protein_id="AAH05816.2"
/db_xref="GeneID:1840"
/db_xref="MIM:602582"
/translation="VRRYMQKVKNPPDEDCTICMERLVTASGYEGVLRHKGVRPELVG
RLGRCGHMYHLLCLVAMYSNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEFHLIPHSLP
GFPDTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRHCYLPNNEKGRKVLRLLITAW
ERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGYPDASYLDNVLAELTAQGV
SEAAAKA"
misc_feature 43..234
/gene="DTX1"
/note="RING; Region: RING-finger (Really Interesting New
Gene) domain, a specialized type of Zn-finger of 40 to 60
residues that binds two atoms of zinc"
/db_xref="CDD:cd00162"
BASE COUNT 438 a 551 c 487 g 340 t
ORIGIN
1 gttcgaagat acatgcagaa ggtgaaaaac ccacctgatg aggactgcac catctgcatg
61 gagcgactgg tcacagcatc aggctacgag ggcgtgcttc ggcacaaggg cgtgcggcct
121 gagctcgtgg gccgcctggg ccgctgtggc cacatgtacc acctgctgtg cctcgtggcc
181 atgtactcca atggcaacaa ggatggcagc ctgcagtgcc ccacctgcaa ggccatctac
241 ggggagaaga cgggtacgca gccgcctggg aagatggagt tccacctcat cccccactcg
301 ctgcccggct tccctgatac ccagaccatc cgcatcgtct atgacatccc cacaggcatc
361 cagggccctg agcaccccaa ccccgggaag aagttcaccg caagaggatt ccctcgccac
421 tgctatctac ccaacaacga gaaaggccgg aaggtgctgc ggctgctcat cacggcctgg
481 gagagaagac tcatcttcac tatcggcacg tccaacacca cgggcgagtc ggacaccgtg
541 gtgtggaacg agatccacca caagaccgag tttggatcca acctcacggg ccacggctac
601 ccggacgcta gctacctaga caacgtgctg gctgagctca cagcccaggg cgtatccgag
661 gctgcagcca aggcttgagg cccaaggctg cccaccttcc ctcctgcttt gcccctggtc
721 cggcaaatgc ctccttcgcc aggtgtgtcc tggtagccca ggttcagggc tggggaggag
781 cctgcggaag gggccgcagc cattcagggg acctgcctgg tggcagctgg gatgaagaga
841 gatggcatgt caggctggcc ccgaatcata gctccctgag agggccaagc agagagtact
901 ggaaacctcc ctaccaaaaa gacagagacc cgccccctca cacacaaaca cacatgtcct
961 gttgaactca tgcacgcaca cccacgtgcc tgtacttgcc cccaggctgg aagagaagag
1021 acagaaagac cccatgaccc ccccatgtgg atccccatct gtgtctcagt tgcatctgta
1081 cagccttgtc tgcaaactgg aggatgcggg gcaagccctt aggggcctgc cagggctcgg
1141 ggggcaaaga gggactcggg aaactcagtg taccccagat gcctcaccca ttccgtgtca
1201 tcacccatgt ctgccaccca ctgattgggc aattgtgggc ccatggggtg gaagccccca
1261 gatgactgag cagttctaca aaaaatggcc agcacgagcg gggactagag ggtcctgatt
1321 ttgtgtctgt gcctcttcat ctctctggac tctgatctcc ttctcccttc ccatctccag
1381 gccttctgtc tgtcccagat aaaggcgctg ttctcccatc ctccctaccc catcctctcc
1441 accaaatcgc tcccaatttt gagagccaaa ggctggcgct tctgacttca ggagcgaaag
1501 gaggaggcct agtttgggcc gatgtatttt aaagcagagt ggacagcaga gagtcaattt
1561 ccctttcgtt gggagtgggc agtggggtgg ctaattgtct tcggccaacc aggggcctgt
1621 tgcccaggca actcaccagc tccgcctctg ctgattggct gccacggtgg gagtcagcca
1681 agatttaaag ggatgccagc gattgctctt ttcaaaacct accagtccca ctgtgggtgg
1741 agaaataaat ggtctttctc ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaa
//