LOCUS BC005405 1944 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens glucosidase, alpha; neutral AB, mRNA (cDNA clone
IMAGE:3458604), partial cds.
ACCESSION BC005405
VERSION BC005405.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1944)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1944)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 4 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12408653.
FEATURES Location/Qualifiers
source 1..1944
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3458604"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1944
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/db_xref="GeneID:23193"
/db_xref="MIM:104160"
CDS <1..942
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/codon_start=1
/product="GANAB protein"
/protein_id="AAH05405.1"
/db_xref="GeneID:23193"
/db_xref="MIM:104160"
/translation="ACSGAGGGAAMKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCL
PPLRAAAEQLRQKDLRISQLQAELRRPPPAPAQPPEPEALPTIYVVTPTYARPLWVQY
PQDVTTFNIDDQYLLGDALLVHPVSDSGAHGVQVYLPGQGEVWYDIQSYQKHHGPQTL
YLPVTLSSIPVFQRGGTIVPRWMRVRRSSECMKDDPITLFVALSPQGTAQGELFLDDG
HTFNYQTRQEFLLRRFSFSGNTLVSSSADPEGHFETPIWIERVVIIGAGKPAAVVLQT
KGSPESRLSFQHDPETSVLVLRKPGINVASDWSIHLR"
misc_feature 277..822
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/note="Glyco_hydro_31; Region: Glycosyl hydrolases family
31. Glycosyl hydrolases are key enzymes of carbohydrate
metabolism. Family 31 comprises of enzymes that are, or
similar to, alpha- galactosidases"
/db_xref="CDD:pfam01055"
BASE COUNT 412 a 548 c 484 g 500 t
ORIGIN
1 gcctgctcgg gcgcgggcgg cggcgcggcc atgaagctga agctgaagaa cgtgtttctc
61 gcctacttcc tggtgtcgat cgccggcctc ctctacgcgc tggtacagct cggccagcca
121 tgtgactgcc ttcctcccct gcgggcagca gccgagcagc tacggcagaa ggatctgagg
181 atttcccagc tgcaagcgga actccgacgg ccaccccctg cccctgccca gccccctgaa
241 cccgaggccc tgcctactat ctatgttgtt acccccacct atgccaggcc cctgtgggtg
301 cagtaccctc aggatgtgac taccttcaat atagatgatc agtacttgct tggggatgcg
361 ttgctggttc accctgtatc agactctgga gcccatggtg tccaggtcta tctgcctggc
421 caaggggagg tgtggtatga cattcaaagc taccagaagc atcatggtcc ccagaccctg
481 tacctgcctg taactctaag cagtatccct gtgttccagc gtggagggac aatcgtgcct
541 cgatggatgc gagtgcggcg gtcttcagaa tgtatgaagg atgaccccat cactctcttt
601 gttgcactta gccctcaggg tacagctcaa ggagagctct ttctggatga tgggcacacg
661 ttcaactatc agactcgcca agagttcctg ctgcgtcgat tctcattctc tggcaacacc
721 cttgtctcca gctcagcaga ccctgaagga cactttgaga caccaatctg gattgagcgg
781 gtggtgataa taggggctgg aaagccagca gctgtggtac tccagacaaa aggatctcca
841 gaaagccgcc tgtccttcca gcatgaccct gagacctctg tgttggtcct gcgcaagcct
901 ggcatcaatg tggcatctga ttggagtatt cacctgcgat aacccaaggg atgttctggg
961 ttagggggag ggaaggggag cattagtgct gagagatatt ctttcttctg ccttggagtt
1021 cggccctccc cagacttcac ttatgctagt ctaagaccca gattctgcca acatttgggc
1081 aggatgagag ggctgaccct gggctccaaa ttcctcttgt gatctcctca cctctcccac
1141 tccattgata ccaactcttt cccttcattc ccccaacatc ctgttgctct aactggagca
1201 cattcactta cgaacaccag gaaaccacag ggcccttgtc gccccttctc tttcccttat
1261 ttaggagccc tgaactcccc cagagtctat ccattcatgc ctcttgtatg ttgatgccac
1321 ttcttggaag aagatgaggg caatgagtta gggctccttt tccccttccc tcccaccaga
1381 ttgctctccc acctttcatt tcttcctcca ggctttactc ccctttttat gccccaccga
1441 tacactggga ccacccctta ccccggacag gatgaatgga tcaaaggagt gaggttgcta
1501 aagaacatcc ttttccctct cattctaccc ttttcctctc cccgattcct tgtagagctg
1561 ctgcaattct tagaggggca gttctacctc ctctgtccct cggcagaaag acgtttccac
1621 acctcttagg ggatgcgcat taaacttctt ttgccccctt cttgtcccct ttgaggggca
1681 cttaagatgg agaaatcagt tgtggtttca gtgaatcatg gtcacctgta tttattgcta
1741 ggagaagcct gagggtgggg ggagatgatc atgtgtgctc ggggttggct ggaagccctg
1801 ggtggggggt tgggggagga ctaatgggga gtcggggaat atttgtgggt atttttttta
1861 cttcctcttg gttcccagct gtgacacgtt ttgatcaaag gagaaacaat aaagggataa
1921 accataaaaa aaaaaaaaaa aaaa
//