LOCUS BC005348 663 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens apolipoprotein C-II, mRNA (cDNA clone MGC:12445
IMAGE:3935036), complete cds.
ACCESSION BC005348
VERSION BC005348.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC005348.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32130517.
FEATURES Location/Qualifiers
source 1..663
/db_xref="H-InvDB:HIT000032398"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12445 IMAGE:3935036"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..663
/gene="APOC2"
/db_xref="GeneID:344"
/db_xref="HGNC:HGNC:609"
/db_xref="MIM:608083"
CDS 14..319
/gene="APOC2"
/codon_start=1
/product="apolipoprotein C-II"
/protein_id="AAH05348.3"
/db_xref="GeneID:344"
/db_xref="HGNC:HGNC:609"
/db_xref="MIM:608083"
/translation="MGTRLLPALFLVLLVLGFEVQGTQQPQQDEMPSPTLLTQVKESL
SSYWESAKTAAQNLYEKTYLPAVDEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE"
BASE COUNT 201 a 179 c 141 g 142 t
ORIGIN
1 gtctctggac actatgggca cacgactcct cccagctctg tttcttgtcc tcctggtatt
61 gggatttgag gtccagggga cccaacagcc ccagcaagat gagatgccta gcccgaccct
121 cctcacccag gtgaaggaat ctctctccag ttactgggag tcagcaaaga cagccgccca
181 gaacctgtac gagaagacat acctgcccgc tgtagatgag aaactcaggg acttgtacag
241 caaaagcaca gcagccatga gcacttacac aggcattttt actgaccaag ttctttctgt
301 gctgaaggga gaggagtaac agccagaccc cccatcagtg gacaagggga gagtccccta
361 ctcccctgat cccccaggtt cagactgagc tcccccttcc cagtagctct tgcatcctcc
421 tcccaactct agcctgaatt cttttcaata aaaaatacaa ttcaagttgc ttctcatgga
481 tggcactgct tttctgagga ctcaagggcc aagatggagg ggctgactca gtccagccaa
541 catttaatga gcacctactt tatgtatgga gctctaaccc atgggtccat gggaataaag
601 cagtgaatag taacaataaa taatcgtaac aacaaaaaaa aaaaaaaaaa aaaaaaaaaa
661 aaa
//