LOCUS BC005336 1358 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens asparagine-linked glycosylation 13 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:12423 IMAGE:3996922), complete
cds.
ACCESSION BC005336
VERSION BC005336.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: b Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20070304.
FEATURES Location/Qualifiers
source 1..1358
/db_xref="H-InvDB:HIT000032389"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12423 IMAGE:3996922"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1358
/gene="ALG13"
/gene_synonym="MDS031"
/gene_synonym="YGL047W"
/db_xref="GeneID:79868"
/db_xref="HGNC:HGNC:30881"
CDS 35..532
/gene="ALG13"
/gene_synonym="MDS031"
/gene_synonym="YGL047W"
/codon_start=1
/product="asparagine-linked glycosylation 13 homolog (S.
cerevisiae)"
/protein_id="AAH05336.1"
/db_xref="GeneID:79868"
/db_xref="HGNC:HGNC:30881"
/translation="MKCVFVTVGTTSFDDLIACVSAPDSLQKIESLGYNRLILQIGRG
TVVPEPFSTESFTLDVYRYKDSLKEDIQKADLVISHAGAGSCLETLEKGKPLVVVINE
KLMNNHQLELAKQLHKEGHLFYCTCSTLPGLLQSMDLSTLKCYPPGQPEKFSAFLDKV
VGLQK"
BASE COUNT 488 a 222 c 242 g 406 t
ORIGIN
1 ggcccttgcg atcagggctt gaggaacccg cgccatgaag tgcgtgtttg ttaccgtagg
61 gaccaccagc tttgacgacc tcattgcgtg tgtgtcggcg cccgacagtc tgcaaaaaat
121 cgagagcctt ggttacaacc gacttatcct gcaaattggt agaggaacgg tggtacctga
181 acccttcagt actgagtcgt ttactctgga tgtttacagg tacaaggatt ccttgaaaga
241 agacattcag aaagcagatc ttgttattag tcacgcaggt gcaggaagct gtttggagac
301 tctggaaaaa ggaaagccac tcgtagtggt tataaacgaa aagttgatga acaatcatca
361 gctggaactg gcaaagcagc tacacaaaga gggtcatctc ttctattgta cctgcagcac
421 gcttcctggg ctgttacagt caatggactt atcaacactg aaatgttatc ctcctggcca
481 gccagaaaaa ttttctgcat ttttggataa agttgttgga ttacaaaaat aaacactaaa
541 ctctcaacac tttaaaagca acccccaaat tcaacctatg taatgtgatt aaatcaaatt
601 aaatacataa tatatattta caaaataata taattaataa acttcctaca tctatagaat
661 gtataggaaa ttttatgttg tgcacatttg cattgggtcc aaatcctaat tgcagtttag
721 tgaaattact agattttttt ctaatcttca gtatgtagtg agcattcaca ggttttctcc
781 tagaatctca agtggaattg gaatcataaa aatgaatgag atttgaaaac tttcacaaag
841 attataaatg tagttagttt gatactcctt agaataaaaa aatgaaacag taacaacttt
901 tatgtaaaaa aattttacat aagagttagc atctttagct ttataatcta aggaaccaaa
961 tttaaaaaat gatggattat gctctgtgaa atgaaaagtt caatcattgc ctaaaaaaga
1021 tgatcaagtt agttgatctc ttgtacttgg aaaagctact tttttcctaa agaacagagt
1081 ggagtggata tattcacttt ttttttctaa aacatacaaa gtgataaaat aatcgtgcct
1141 aatgtcaaaa ctttactggt ttgagaagaa taatcaaaaa ggacttatac caataggact
1201 tactattgtt ttttaaggat ctcctctcac agtggtaatg aaacattaac tgtaacagaa
1261 atttacaatt tatgtgctta taaaattagt tttatgaatg aacaataaac tgatgcatat
1321 aatggctgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//