LOCUS BC005319 1563 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens glycophorin A (MNS blood group), mRNA (cDNA clone
MGC:12403 IMAGE:3930700), complete cds.
ACCESSION BC005319
VERSION BC005319.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1563)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8051602.
FEATURES Location/Qualifiers
source 1..1563
/db_xref="H-InvDB:HIT000032373"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12403 IMAGE:3930700"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1563
/gene="GYPA"
/gene_synonym="CD235a"
/gene_synonym="GPA"
/gene_synonym="GPErik"
/gene_synonym="GpMiIII"
/gene_synonym="GPSAT"
/gene_synonym="HGpMiIII"
/gene_synonym="HGpMiV"
/gene_synonym="HGpMiX"
/gene_synonym="HGpMiXI"
/gene_synonym="HGpSta(C)"
/gene_synonym="MN"
/db_xref="GeneID:2993"
/db_xref="HGNC:HGNC:4702"
/db_xref="MIM:111300"
CDS 58..510
/gene="GYPA"
/gene_synonym="CD235a"
/gene_synonym="GPA"
/gene_synonym="GPErik"
/gene_synonym="GpMiIII"
/gene_synonym="GPSAT"
/gene_synonym="HGpMiIII"
/gene_synonym="HGpMiV"
/gene_synonym="HGpMiX"
/gene_synonym="HGpMiXI"
/gene_synonym="HGpSta(C)"
/gene_synonym="MN"
/codon_start=1
/product="GYPA protein"
/protein_id="AAH05319.1"
/db_xref="GeneID:2993"
/db_xref="HGNC:HGNC:4702"
/db_xref="MIM:111300"
/translation="MYGKIIFVLLLSAIVSISALSTTEVAMHTSTSSSVTKSYISSQT
NDTHKRDTYAATPRAHEVSEISVRTVYPPEEETGERVQLAHHFSEPEITLIIFGVMAG
VIGTILLISYGIRRLIKKSPSDVKPLPSPDTDVPLSSVEIENPETSDQ"
BASE COUNT 554 a 276 c 250 g 483 t
ORIGIN
1 gcagttgtct ttggtagttt tttgcactaa cttcaggaac cagctcatga tctcaggatg
61 tatggaaaaa taatctttgt attactattg tcagcaattg tgagcatatc agcattaagt
121 accactgagg tggcaatgca cacttcaacc tcttcttcag tcacaaagag ttacatctca
181 tcacagacaa atgatacgca caaacgggac acatatgcag ccactcctag agctcatgaa
241 gtttcagaaa tttctgttag aactgtttac cctccagaag aggaaaccgg agaaagggta
301 caacttgccc atcatttctc tgaaccagag ataacactca ttatttttgg ggtgatggct
361 ggtgttattg gaacgatcct cttaatttct tacggtattc gccgactgat aaagaaaagc
421 ccatctgatg taaaacctct cccctcacct gacacagacg tgcctttaag ttctgttgaa
481 atagaaaatc cagagacaag tgatcaatga gaatctgttc accaaaccaa atgtggaaag
541 aacacaaaga agacataaga cttcagtcaa gtgaaaaatt aacatgtgga ctggacactc
601 caataaatta tatacctgcc taagttgtac aatttcagaa tgcaattttc attataatga
661 gttccagtga ctcaatgatg gggaaaaaaa tctctgctca ttaatatttc aagataaaga
721 acaaatgttt ccttgaatgc ttgcttttgt gtgttagcat aatttttaga attgtttgag
781 aattctgatc caaaacttta gttgaattca tctacgtttg tttaatatta acttaaccta
841 ttctattgta ttataatgat gattctgtca aatgaaaggc ttgaaatgcc tagatgaagt
901 ttagattttc ttcctattgt aaacttttga gtctggtttc attgttttaa ataaattaag
961 gggacactaa agtcctatca ttcatttcct tcattgctga acaggcaaga tataatatta
1021 catgaatgat tactatattt tgttcacact aataaagctt atgctcagaa atgccataca
1081 cacacacaaa cacacacatt tatcatttaa tgcataaatc aacacaaaag gttttcccat
1141 taatatgaaa tattacatat atataagtgc catatttaaa ataatttgtc taacagtaga
1201 actgtgtcgg agcactcact gaagcttgca ttccactgaa agagttattt gtgtaagtag
1261 agtatccgga gaaggaaaag aacttacgac ctttctttat aacagaaact caactctaaa
1321 ttcaacaaga tgtgcaaacc ggacatgcag gtgaatattt taataggtta ctataaggtt
1381 ctcaattaaa ttctttaatc tgtccagtcc cagtttctct tattaataaa actttggaaa
1441 ttgctttaaa ccatttaaag gaaatttcta gatatagaaa ctaaggactg tgactataca
1501 gctgtcactc atttgtagta aaacttaaaa agcaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaa
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