LOCUS BC005277 954 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glutathione peroxidase 2 (gastrointestinal), mRNA
(cDNA clone MGC:12324 IMAGE:3996732), complete cds.
ACCESSION BC005277
VERSION BC005277.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32967606.
FEATURES Location/Qualifiers
source 1..954
/db_xref="H-InvDB:HIT000086504"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12324 IMAGE:3996732"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..954
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
CDS 20..592
/gene="GPX2"
/gene_synonym="GI-GPx"
/gene_synonym="GPRP"
/gene_synonym="GSHPx-2"
/gene_synonym="GSHPX-GI"
/codon_start=1
/transl_except=(pos:137..139,aa:Sec)
/product="glutathione peroxidase 2 (gastrointestinal)"
/protein_id="AAH05277.1"
/db_xref="GeneID:2877"
/db_xref="HGNC:HGNC:4554"
/db_xref="MIM:138319"
/translation="MAFIAKSFYDLSAISLDGEKVDFNTFRGRAVLIENVASLUGTTT
RDFTQLNELQCRFPRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLV
QKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIG
PEGEPFRRYSRTFPTINIEPDIKRLLKVAI"
BASE COUNT 231 a 277 c 226 g 220 t
ORIGIN
1 gctcactctg cgcttcacca tggctttcat tgccaagtcc ttctatgacc tcagtgccat
61 cagcctggat ggggagaagg tagatttcaa tacgttccgg ggcagggccg tgctgattga
121 gaatgtggct tcgctctgag gcacaaccac ccgggacttc acccagctca acgagctgca
181 atgccgcttt cccaggcgcc tggtggtcct tggcttccct tgcaaccaat ttggacatca
241 ggagaactgt cagaatgagg agatcctgaa cagtctcaag tatgtccgtc ctgggggtgg
301 ataccagccc accttcaccc ttgtccaaaa atgtgaggtg aatgggcaga acgagcatcc
361 tgtcttcgcc tacctgaagg acaagctccc ctacccttat gatgacccat tttccctcat
421 gaccgatccc aagctcatca tttggagccc tgtgcgccgc tcagatgtgg cctggaactt
481 tgagaagttc ctcatagggc cggagggaga gcccttccga cgctacagcc gcaccttccc
541 aaccatcaac attgagcctg acatcaagcg cctccttaaa gttgccatat agatgtgaac
601 tgctcaacac acagatctcc tactccatcc agtcctgagg agccttagga tgcagcatgc
661 cttcaggaga cactgctgga cctcagcatt cccttgatat cagtcccctt cactgcagag
721 ccttgccttt cccctctgcc tgtttccttt tcctctccca accctctggt tggtgattca
781 acttgggctc caagacttgg gtaagctctg ggccttcaca gaatgatggc accttcctaa
841 accctcatgg gtggtgtctg agaggcgtga agggcctgga gccactctgc tagaagagac
901 caataaaggg caggtgtgga aacggaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//