LOCUS BC005240 1256 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HCLS1 associated protein X-1, mRNA (cDNA clone
MGC:12268 IMAGE:3931805), complete cds.
ACCESSION BC005240
VERSION BC005240.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1256)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1256)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66363692.
FEATURES Location/Qualifiers
source 1..1256
/db_xref="H-InvDB:HIT000032312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12268 IMAGE:3931805"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1256
/gene="HAX1"
/gene_synonym="HCLSBP1"
/gene_synonym="HS1BP1"
/db_xref="GeneID:10456"
/db_xref="HGNC:HGNC:16915"
/db_xref="MIM:605998"
CDS 214..1053
/gene="HAX1"
/gene_synonym="HCLSBP1"
/gene_synonym="HS1BP1"
/codon_start=1
/product="HCLS1 associated protein X-1"
/protein_id="AAH05240.1"
/db_xref="GeneID:10456"
/db_xref="HGNC:HGNC:16915"
/db_xref="MIM:605998"
/translation="MSLFDLFRGFFGFPGPRSHRDPFFGGMTRDEDDDEEEEEEGGSW
GRGNPRFHSPQHPPEEFGFGFSFSPGGGIRFHDNFGFDDLVRDFNSIFSDMGAWTLPS
HPPELPGPESETPGERLREGQTLRDSMLKYPDSHQPRIFGGVLESDARSESPQPAPDW
GSQRPFHRFDDVWPMDPHPRTREDNDLDSQVSQEGLGPVLQPQPKSYFKSISVTKITK
PDGIVEERRTVVDSEGRTETTVTRHEADSSPRGDPESPRPPALDDAFSILDLFLGRWF
RSR"
BASE COUNT 312 a 330 c 325 g 289 t
ORIGIN
1 aaagataaag cctttcaaat ttgaggaaga ccttcggtcc cgcctccatt tcacgtccgg
61 cttaccgtcg tttacgacag tgtcaggatc gcgggcttgc tttccggtag cgtgggctga
121 cgcctcgctc aatttctcac agggctgcgc aggtttcccc cgtctgcgaa tggaccactg
181 gaggggttca aaggttcgcg tcccagtacg ggaatgagcc tctttgatct cttccggggc
241 tttttcggct ttcctggacc tcggagccac agagatccct tttttggagg gatgactcga
301 gatgaagatg atgatgagga agaagaagaa gaagggggct catggggccg tgggaaccca
361 aggttccata gccctcagca cccccctgag gaatttggct tcggcttcag cttcagccca
421 ggaggaggga tacgtttcca cgataacttc ggctttgatg acctagtacg agatttcaat
481 agcatcttca gcgatatggg ggcctggacc ttgccttccc atcctcctga acttccaggt
541 cctgagtcag agacacctgg tgagagacta cgggagggac agacacttcg ggactcaatg
601 cttaagtatc cagatagtca ccagcccagg atctttgggg gggtcttgga gagtgatgca
661 agaagtgaat ccccccaacc agcaccagac tggggctccc agaggccatt tcataggttt
721 gatgatgtat ggcctatgga cccccatcct agaaccagag aggacaatga tcttgattcc
781 caggtttccc aggagggtct tggcccggtt ctacagcccc agcccaaatc ctatttcaag
841 agcatctctg tgaccaagat cactaaacca gatgggatag tggaggagcg ccggactgtg
901 gtggacagtg agggccggac agagactaca gtaacccgac acgaagcaga tagcagtcct
961 aggggtgatc cagaatcacc aagacctcca gccctggatg atgccttttc catcctggac
1021 ttattcctgg gacgttggtt ccggtcccgg tagccttgtt aaccctcaga ggccttcaag
1081 tcctttccac ctctcaccca ttgcccacca ttaataagct tagcttctct tgccacctca
1141 ggggcttgga tatgtggaat agtgaactgg ggccatgtca gtttgtcact cacccaaact
1201 gaccaataaa acctttattt atgcgaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//