LOCUS BC005235 1199 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens C1D nuclear receptor co-repressor, mRNA (cDNA clone
MGC:12261 IMAGE:3930648), complete cds.
ACCESSION BC005235
VERSION BC005235.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1199)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1199)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27894372.
FEATURES Location/Qualifiers
source 1..1199
/db_xref="H-InvDB:HIT000032308"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12261 IMAGE:3930648"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1199
/gene="C1D"
/gene_synonym="LRP1"
/gene_synonym="SUN-CoR"
/gene_synonym="SUNCOR"
/db_xref="GeneID:10438"
/db_xref="HGNC:HGNC:29911"
/db_xref="MIM:606997"
CDS 64..489
/gene="C1D"
/gene_synonym="LRP1"
/gene_synonym="SUN-CoR"
/gene_synonym="SUNCOR"
/codon_start=1
/product="C1D nuclear receptor co-repressor"
/protein_id="AAH05235.1"
/db_xref="GeneID:10438"
/db_xref="HGNC:HGNC:29911"
/db_xref="MIM:606997"
/translation="MAGEEINEDYPVEIHEYLSAFENSIGAVDEMLKTMMSVSRNELL
QKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITD
KKKAGKLDRGAASRFVKNALWEPKSKNASKVANKGKSKS"
BASE COUNT 411 a 179 c 225 g 384 t
ORIGIN
1 gcccgaccgc tttccgggag actggagtcg aaggccgtga ggtatttttc taagtcagcc
61 ataatggcag gtgaagaaat taatgaagac tatccagtag aaattcacga gtatttgtca
121 gcgtttgaga attccattgg tgctgtggat gagatgctga agaccatgat gtctgtttct
181 agaaatgagt tgttgcagaa gttggatcca cttgaacaag caaaagtgga tttggtttct
241 gcatacacat taaattcaat gttttgggtt tatttggcaa cccaaggagt taatcctaag
301 gaacatccag taaaacagga attggaaaga atcagagtat atatgaacag agtcaaggaa
361 ataacagaca agaaaaaggc tggcaagctg gacagaggtg cagcttcaag atttgtaaaa
421 aatgccctct gggaaccaaa atcgaaaaat gcatcaaaag ttgccaataa aggaaaaagc
481 aaaagttaac tttttggttt tgatgtacac atattcaaaa agtacatctt cccccccccc
541 ccccccccgc aaaataattc tgtggcaggg caaggtttaa atgtgtttct tattaatatg
601 taaattcaca gtaaatatgt aaagctaaat actttcctct ccaaagatca ttatctttat
661 tgattagcac tgaggatttt aacattgtga tatattatat atttataatt taccatctct
721 tgatgagact cttatttctt tatataggtc agtcttgcaa gtaccatttt ataagcagct
781 gtgaaattta agtgaaatgt tctttgtaaa catttgtact attttaaatg aataatgacc
841 ttatgaagta tgctatctgt aggctgaaat tataggtaca tctgttttca ccatatgata
901 ttaagaaagc gtgaaatgac ttaaatgttc atttttttct gtatagatac tttatcatgt
961 tttcatgatt ttaggaatta ctgctttgtt gatattcaaa gtgtgaaact aaaactttat
1021 ggttgtactt taattcttgg catgttgcct ctatgtccca tttaaaataa aatacattct
1081 cattaacttt agatgggaaa taaggttgta tgttgatgga tgaattttgg catgatgact
1141 gtactctcaa taaaggctga aaatgttgca aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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