LOCUS BC005214 1660 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens grancalcin, EF-hand calcium binding protein, mRNA
(cDNA clone MGC:12231 IMAGE:3996889), complete cds.
ACCESSION BC005214
VERSION BC005214.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1660)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: f Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21614521.
FEATURES Location/Qualifiers
source 1..1660
/db_xref="H-InvDB:HIT000032294"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12231 IMAGE:3996889"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1660
/gene="GCA"
/gene_synonym="GCL"
/db_xref="GeneID:25801"
/db_xref="HGNC:HGNC:15990"
/db_xref="MIM:607030"
CDS 100..753
/gene="GCA"
/gene_synonym="GCL"
/codon_start=1
/product="grancalcin, EF-hand calcium binding protein"
/protein_id="AAH05214.1"
/db_xref="GeneID:25801"
/db_xref="HGNC:HGNC:15990"
/db_xref="MIM:607030"
/translation="MAYPGYGGGFGNFSIQVPGMQMGQPVPETGPAILLDGYSGPAYS
DTYSSAGDSVYTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLD
RDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTL
TTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTMAI"
BASE COUNT 510 a 269 c 326 g 555 t
ORIGIN
1 acctgcagct gcgcctcctt gcacctgcgc ctgtgctttt tctcccagca ctgcggacgc
61 gactcgaggg tgacgctcgc tccgctcgtc ccgctcgtca tggcctaccc gggatacgga
121 ggagggtttg gaaattttag cattcaggtg ccaggaatgc agatgggaca gccagtgcca
181 gaaacaggcc cagctatact cctcgatgga tactctgggc cagcatattc agacacttat
241 tcctcagctg gtgactccgt gtatacttac ttcagtgctg ttgctggaca ggatggtgaa
301 gtggatgctg aagaacttca gagatgtttg acacagtctg gaattaatgg aacttactct
361 cccttcagtt tggaaacctg cagaattatg attgccatgt tggatagaga tcacacagga
421 aaaatgggat ttaatgcatt caaagagcta tgggcagctc ttaatgcctg gaaggaaaac
481 ttcatgactg ttgatcaaga tggaagtggc acagtagaac atcatgagtt gcgtcaagcc
541 attggtctta tgggttatag gttgagtcct caaacattaa ctacaattgt taaacgttat
601 agcaagaatg gcagaatttt ctttgatgat tatgttgctt gctgtgtgaa gcttcgagca
661 ttgacagatt tctttaggaa aagagaccac ttgcaacaag ggtctgcgaa tttcatatat
721 gacgattttt tgcagggcac tatggcaatt tgaatgctta gaattttaaa cctgaagaga
781 cactgtgaat tcttttgttt ggaagaagtg aactggacta ctttaaaact tttaagggtt
841 ttctatgttc ttcctacctg ttaaacctct tccctttctg tgtgttttta ttttagcaga
901 tagttcaaag caataaaaga tttctttttt aatttgaggt attactgctt ttggaaaagt
961 tattttataa atatgtgcat attgtcataa aatattgtat gattaattga tttaaataat
1021 gcttagcctt aattttagat aatgtaaatt tagaggaatg tactttacaa gatagattgt
1081 ataagaagcc aaataatgaa agcctagaaa aaactaattt atacttatct gaaggttaca
1141 aattagactt ttaaattttc tttgtagttg gtggtgtttg agggttggct agaaatgaaa
1201 gcctggattt tgtgccatgt ttgtaatata gtttgttcct tgatcaaata atcagagaaa
1261 agaaacttaa agatctttgt ctgtgaagaa gaaaattatc tccctagttc aatctgtagt
1321 gaaataagac tacagaaggc attgtttttt ccttttttat tttttgtatt atatattttt
1381 cttaaatatg ttttattgtc ttctctaagc aaagagttct taataaacat agtatttctc
1441 tctgcgtcct atttcattag tgaagacata gttcacctaa aatggcatcc tgctctgaat
1501 ctagactttt tagaaatggc atatgttttt gatgatatgt caacattcaa aattgtccta
1561 attaaattgt tgtttaaatg taatgtcaac tctttataaa cttaaaaata aacaagtaat
1621 taaccactcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//