LOCUS BC005190 1430 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens 3-hydroxyisobutyryl-Coenzyme A hydrolase, mRNA (cDNA
clone IMAGE:3685714), partial cds.
ACCESSION BC005190
VERSION BC005190.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1430)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1430)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37594468.
FEATURES Location/Qualifiers
source 1..1430
/db_xref="H-InvDB:HIT000032277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3685714"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1430
/gene="HIBCH"
/gene_synonym="HIBYL-COA-H"
/db_xref="GeneID:26275"
/db_xref="HGNC:HGNC:4908"
/db_xref="MIM:610690"
CDS <1..1089
/gene="HIBCH"
/gene_synonym="HIBYL-COA-H"
/codon_start=1
/product="HIBCH protein"
/protein_id="AAH05190.2"
/db_xref="GeneID:26275"
/db_xref="HGNC:HGNC:4908"
/db_xref="MIM:610690"
/translation="GAHARRWNSPGDSRSAALASECLATGQREMWRLMSRFNAFKRTN
TILHHLRMSKHTDAAEEVLLEKKGCAGVITLNRPKFLNALTLNMIRQIYPQLKKWEQD
PETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYV
ALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYF
LALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESK
IDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKIT
LRQLMEGSSKTLQEVLTMEYRLSQACMF"
BASE COUNT 473 a 242 c 330 g 385 t
ORIGIN
1 ggggctcacg cgaggcgctg gaacagtccg ggagattctc gctctgctgc tttagcttcg
61 gagtgtttgg cgacggggca gcgcgagatg tggaggctca tgtcgaggtt taatgcattc
121 aaaaggacta ataccatact gcaccatttg agaatgtcca agcacacaga tgcagcagaa
181 gaggtgctat tggaaaaaaa aggttgcgcg ggagtcataa cactaaacag accaaagttc
241 ctcaatgcac tgactcttaa tatgattcgg cagatttatc cacagctaaa gaagtgggaa
301 caagatcctg aaactttcct gatcattata aagggagcag gaggaaaggc tttctgtgcc
361 gggggtgata tcagagtgat ctcggaagct gaaaaggcaa aacagaagat agctccagtt
421 ttcttcagag aagaatatat gctgaataat gctgttggtt cttgccagaa accttatgtt
481 gcacttattc atggaattac aatgggtggg ggagttggtc tctcagtcca tgggcaattt
541 cgagtggcta cagaaaagtg tctttttgct atgccagaaa ctgcaatagg actgttccct
601 gatgtgggtg gaggttattt cttgccacga ctccaaggaa aacttggtta cttccttgca
661 ttaacaggat tcagactaaa aggaagagat gtgtacagag caggaattgc tacacacttt
721 gtagattctg aaaagttggc catgttagag gaagatttgt tagccttgaa atctccttca
781 aaagaaaata ttgcatctgt cttagaaaat taccatacag agtctaagat tgatcgagac
841 aagtctttta tacttgagga acacatggac aaaataaaca gttgtttttc agccaatact
901 gtggaagaaa ttattgaaaa cttacagcaa gatggttcat cttttgccct agagcaattg
961 aaggtaatta ataaaatgtc tccaacatct ctaaagatca cactaaggca actcatggag
1021 gggtcttcaa agaccttgca agaagtacta actatggagt atcggctaag tcaagcttgt
1081 atgttttaat tgataaagac cagagtccaa aatggaaacc agctgatcta aaagaagtta
1141 ctgaggaaga tttgaataat cactttaagt ctttgggaag cagtgatttg aaattttgag
1201 gtgacaggct tttaaggtat attttgtagc atgggttggc aatctacagc atgtgggcca
1261 aatccagcct gctgcctgtt tttatatacc ctgtaagcta agaatggttt ccgcattttt
1321 aaatggttgg gaaaagaaat caaagactaa taattcatga cgtgaaaatt atcagaattc
1381 acaaataaag ctttattgga acaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//