LOCUS BC005146 1125 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens lectin, galactoside-binding, soluble, 4, mRNA (cDNA
clone MGC:2065 IMAGE:2988384), complete cds.
ACCESSION BC005146
VERSION BC005146.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1125)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1125)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC005146.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6006017.
FEATURES Location/Qualifiers
source 1..1125
/db_xref="H-InvDB:HIT000032246"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2065 IMAGE:2988384"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1125
/gene="LGALS4"
/gene_synonym="GAL4"
/gene_synonym="L36LBP"
/db_xref="GeneID:3960"
/db_xref="HGNC:HGNC:6565"
/db_xref="MIM:602518"
CDS 44..1015
/gene="LGALS4"
/gene_synonym="GAL4"
/gene_synonym="L36LBP"
/codon_start=1
/product="lectin, galactoside-binding, soluble, 4"
/protein_id="AAH05146.1"
/db_xref="GeneID:3960"
/db_xref="HGNC:HGNC:6565"
/db_xref="MIM:602518"
/translation="MAYVPAPGYQPTYNPTLPYYQPIPGGLNVGMSVYIQGVASEHMK
RFFVNFVVGQDPGSDVAFHFNPRFDGWDKVVFNTLQGGKWGSEERKRSMPFKKGAAFE
LVFIVLAEHYKVVVNGNPFYEYGHRLPLQMVTHLQVDGDLQLQSINFIGGQPLRPQGP
PMMPPYPGPGHCHQQLNSLPTMEGPPTFNPPVPYFGRLQGGLTARRTIIIKGYVPPTG
KSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGSWGSEEKKITHNPFGPGQFFDL
SIRCGLDRFKVYANGQHLFDFAHRLSAFQRVDTLEIQGDVTLSYVQI"
BASE COUNT 270 a 330 c 290 g 235 t
ORIGIN
1 gcagctcttc tcacaggacc agccactagc gcagcctcga gcgatggcct atgtccccgc
61 accgggctac cagcccacct acaacccgac gctgccttac taccagccca tcccgggcgg
121 gctcaacgtg ggaatgtctg tttacatcca aggagtggcc agcgagcaca tgaagcggtt
181 cttcgtgaac tttgtggttg ggcaggatcc gggctcagac gtcgccttcc acttcaatcc
241 gcggtttgac ggctgggaca aggtggtctt caacacgttg cagggcggga agtggggcag
301 cgaggagagg aagaggagca tgcccttcaa aaagggtgcc gcctttgagc tggtcttcat
361 agtcctggct gagcactaca aggtggtggt aaatggaaat cccttctatg agtacgggca
421 ccggcttccc ctacagatgg tcacccacct gcaagtggat ggggatctgc aacttcaatc
481 aatcaacttc atcggaggcc agcccctccg gccccaggga cccccgatga tgccacctta
541 ccctggtccc ggacattgcc atcaacagct gaacagcctg cccaccatgg aaggaccccc
601 aaccttcaac ccgcctgtgc catatttcgg gaggctgcaa ggagggctca cagctcgaag
661 aaccatcatc atcaagggct atgtgcctcc cacaggcaag agctttgcta tcaacttcaa
721 ggtgggctcc tcaggggaca tagctctgca cattaatccc cgcatgggca acggtaccgt
781 ggtccggaac agccttctga atggctcgtg gggatccgag gagaagaaga tcacccacaa
841 cccatttggt cccggacagt tctttgatct gtccattcgc tgtggcttgg atcgcttcaa
901 ggtttacgcc aatggccagc acctctttga ctttgcccat cgcctctcgg ccttccagag
961 ggtggacaca ttggaaatcc agggtgatgt caccttgtcc tatgtccaga tctaatctat
1021 tcctggggcc ataactcatg ggaaaacaga attatcccct aggactcctt tctaagcccc
1081 taataaaatg tctgagggtg aaaaaaaaaa aaaaaaaaaa aaaaa
//