LOCUS BC005143 1353 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ADP-ribosylation-like factor 6 interacting protein 5,
mRNA (cDNA clone MGC:1917 IMAGE:3510436), complete cds.
ACCESSION BC005143
VERSION BC005143.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1353)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1353)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC005143.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51944964.
FEATURES Location/Qualifiers
source 1..1353
/db_xref="H-InvDB:HIT000032244"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1917 IMAGE:3510436"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1353
/gene="ARL6IP5"
/gene_synonym="addicsin"
/gene_synonym="DERP11"
/gene_synonym="GTRAP3-18"
/gene_synonym="hp22"
/gene_synonym="HSPC127"
/gene_synonym="jmx"
/gene_synonym="JWA"
/gene_synonym="PRAF3"
/db_xref="GeneID:10550"
/db_xref="HGNC:HGNC:16937"
/db_xref="MIM:605709"
CDS 33..599
/gene="ARL6IP5"
/gene_synonym="addicsin"
/gene_synonym="DERP11"
/gene_synonym="GTRAP3-18"
/gene_synonym="hp22"
/gene_synonym="HSPC127"
/gene_synonym="jmx"
/gene_synonym="JWA"
/gene_synonym="PRAF3"
/codon_start=1
/product="ADP-ribosylation-like factor 6 interacting
protein 5"
/protein_id="AAH05143.1"
/db_xref="GeneID:10550"
/db_xref="HGNC:HGNC:16937"
/db_xref="MIM:605709"
/translation="MDVNIAPLRAWDDFFPGSDRFARPDFRDISKWNNRVVSNLLYYQ
TNYLVVAAMMISIVGFLSPFNMILGGIVVVLVFTGFVWAAHNKDVLRRMKKRYPTTFV
MVVMLASYFLISMFGGVMVFVFGITFPLLLMFIHASLRLRNLKNKLENKMEGIGLKRT
PMGIVLDALEQQEEGINRLTDYISKVKE"
BASE COUNT 405 a 260 c 296 g 392 t
ORIGIN
1 attctggagg cgaagaacgc aaagctgaga acatggacgt taatatcgcc ccactccgcg
61 cctgggacga tttcttcccg ggttccgatc gctttgcccg gccggacttc agggacattt
121 ccaaatggaa caaccgcgta gtgagcaacc tgctctatta ccagaccaac tacctggtgg
181 tggctgccat gatgatttcc attgtggggt ttctgagtcc cttcaacatg atcctgggag
241 gaatcgtggt ggtgctggtg ttcacagggt ttgtgtgggc agcccacaat aaagacgtcc
301 ttcgccggat gaagaagcgc taccccacga cgttcgttat ggtggtcatg ttggcgagct
361 atttccttat ctccatgttt ggaggagtca tggtctttgt gtttggcatt acttttcctt
421 tgctgttgat gtttatccat gcatcgttga gacttcggaa cctcaagaac aaactggaga
481 ataaaatgga aggaataggt ttgaagagga caccgatggg cattgtcctg gatgccctag
541 aacagcagga agaaggcatc aacagactca ctgactatat cagcaaagtg aaggaataaa
601 cataacttac ctgagctagg gttgcagcag aaattgagtt gcagcttgcc cttgtccaga
661 cctatgttct gcttgcgttt ttgaaacagg aggtgcacgt accacccaat tatctatggc
721 agcatgcatg tataggccga actattatca gctctgatgt ttcagagaga agacctcaga
781 aaccgaaaga aaaccaccac cctcctattg tgtctgaagt ttcacgtgtg tttatgaaat
841 ctaatgggaa atggatcaca cgatttcttt aagggaatta aaaaaaataa aagaattacg
901 gcttttacag caacaatacg attatcttat aggaaaaaaa aaatcattgt aaagtatcaa
961 gacaatacga gtaaatgaaa aggctgttaa agtagatgac atcatgtgtt agcctgttcc
1021 taatccccta gaattgtaat gtgtgggata taaattagtt tttattattc tcttaaaaat
1081 caaagatgat ctctatcact ttgccacctg tttgatgtgc agtggaaact ggttaagcca
1141 gttgttcata cttcctttac aaatataaag atagctgttt aggatatttt gttacatttt
1201 tgtaaatttt tgaaatgcta gtaatgtgtt ttcaccagca agtatttgtt gcaaacttaa
1261 tgtcattttc cttaagatgg ttacagctat gtaacctgta ttattctgga cggacttatt
1321 aaaatacaaa cagacaaaaa aaaaaaaaaa aaa
//