LOCUS BC004987 2313 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens potassium voltage-gated channel, delayed-rectifier,
subfamily S, member 3, mRNA (cDNA clone MGC:4213 IMAGE:2957877),
complete cds.
ACCESSION BC004987
VERSION BC004987.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: j Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25952107.
FEATURES Location/Qualifiers
source 1..2313
/db_xref="H-InvDB:HIT000032135"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4213 IMAGE:2957877"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2313
/gene="KCNS3"
/gene_synonym="KV9.3"
/gene_synonym="MGC9481"
/db_xref="GeneID:3790"
/db_xref="HGNC:HGNC:6302"
/db_xref="MIM:603888"
CDS 339..1814
/gene="KCNS3"
/gene_synonym="KV9.3"
/gene_synonym="MGC9481"
/codon_start=1
/product="potassium voltage-gated channel,
delayed-rectifier, subfamily S, member 3"
/protein_id="AAH04987.1"
/db_xref="GeneID:3790"
/db_xref="HGNC:HGNC:6302"
/db_xref="MIM:603888"
/translation="MVFGEFFHRPGQDEELVNLNVGGFKQSVDQSTLLRFPHTRLGKL
LTCHSEEAILELCDDYSVADKEYYFDRNPSLFRYVLNFYYTGKLHVMEELCVFSFCQE
IEYWGINELFIDSCCSNRYQERKEENHEKDWDQKSHDVSTDSSFEESSLFEKELEKFD
TLRFGQLRKKIWIRMENPAYCLSAKLIAISSLSVVLASIVAMCVHSMSEFQNEDGEVD
DPVLEGLEIACIAWFTGELAVRLAAAPCQKKFWKNPLNIIDFVSIIPFYATLAVDTKE
EESEDIENMGKVVQILRLMRIFRILKLARHSVGLRSLGATLRHSYHEVGLLLLFLSVG
ISIFSVLIYSVEKDDHTSSLTSIPICWWWATISMTTVGYGDTHPVTLAGKLIASTCII
CGILVVALPITIIFNKFSKYYQKQKDIDVDQCSEDAPEKCHELPYFNIRDIYAQRMHA
FITSLSSVGIVVSDPDSTDASSIEDNEDICNTTSLENCTAK"
BASE COUNT 580 a 535 c 577 g 621 t
ORIGIN
1 ggggccgcgc cgcgaggcct gatccctgca gcgcgggcag gcggcgtcgc agagcggagc
61 tagctggatg cgtccggact cctgcaggtg agagtgattt tccagtgatt gctttggcct
121 gtacaaccag agaacaggat tcttcccttc tttttggcca ccaaatgcct atgtgcacca
181 cacattccag tgtgctgaga agggcagagc ttcttggatg atgatggacg tcccaccggg
241 caggatgaag gcagagcgtg tggcatctcc acctcaaggg tgcagcctga tcttcctctt
301 ctcccttgcc agccagcact ctgccttctg tatccaccat ggtgtttggt gagtttttcc
361 atcgccctgg acaagacgag gaacttgtca acctgaatgt ggggggcttt aagcagtctg
421 ttgaccaaag caccctcctg cggtttcctc acaccagact ggggaagctg cttacttgcc
481 attctgaaga ggccattctg gagctgtgtg atgattacag tgtggccgat aaggaatact
541 actttgatcg gaatccctcc ttgttcagat atgttttgaa tttttattac acggggaagc
601 tgcatgtcat ggaggagctg tgcgtattct cattctgcca ggagatcgag tactggggca
661 tcaacgagct cttcattgat tcttgctgca gcaatcgcta ccaggaacgc aaggaggaaa
721 accacgagaa ggactgggac cagaaaagcc atgatgtgag taccgactcc tcgtttgaag
781 agtcgtctct gtttgagaaa gagctggaga agtttgacac actgcgattt ggtcagctcc
841 ggaagaaaat ctggattaga atggagaatc cagcgtactg cctgtccgct aagcttatcg
901 ctatctcctc cttgagcgtg gtgctggcct ccatcgtggc catgtgcgtt cacagcatgt
961 cggagttcca gaatgaggat ggagaagtgg atgatccggt gctggaagga ttggagatcg
1021 cgtgcattgc ctggttcacc ggggagcttg ccgtccggct ggctgccgct ccttgtcaaa
1081 agaaattctg gaaaaaccct ctgaacatca ttgactttgt ctctattatt cccttctatg
1141 ccacgttggc tgtagacacc aaggaggaag agagtgagga tattgagaac atgggcaagg
1201 tggtccagat cctacggctt atgaggattt tccgaattct aaagcttgcc cggcactcgg
1261 taggacttcg gtctctaggt gccacactga gacacagcta ccatgaagtt gggcttctgc
1321 ttctcttcct ctctgtgggc atttccattt tctctgtgct tatctactcc gtggagaaag
1381 atgaccacac atccagcctc accagcatcc ccatctgctg gtggtgggcc accatcagca
1441 tgacaactgt gggctatgga gacacccacc cggtcacctt ggcgggaaag ctcatcgcca
1501 gcacatgcat catctgtggc atcttggtgg tggcccttcc catcaccatc atcttcaaca
1561 agttttccaa gtactaccag aagcaaaagg acattgatgt ggaccagtgc agtgaggatg
1621 caccagagaa gtgtcatgag ctaccttact ttaacattag ggatatatat gcacagcgga
1681 tgcacgcctt cattaccagt ctctcttctg taggcattgt ggtgagcgat cctgactcca
1741 cagatgcttc aagcattgaa gacaatgagg acatttgtaa caccacctcc ttggagaatt
1801 gcacagcaaa atgagcgggg gtgtttgtgc ctgtttctct tatcctttcc caacattagg
1861 ttaacacagc tttataaacc tcagtgggtt cgttaaaatc atttaattct cagggtgtac
1921 ctttcagcca tagttggaca ttcattgctg aattctgaaa tgatagaatt gtctttattt
1981 ttctctgtga ggtcaattaa atgccttgtt ctgaaattta ttttttacaa gagagagttg
2041 tgatatagtt tggaatataa gataaatggt attgggtggg gtttgtggct acagcttatg
2101 catcattctg tgtttgtcat ttactcacat tgagctaact ttaaattact gacaagtaga
2161 atcaaaggtg cagctgactg agacgacatg catgtaagat ccacaaaatg agacaatgca
2221 tgtaaatcca tgctcatgtt ctaaacatgg aaactaggag cctaataaac ttcctaattc
2281 agtatggaaa aaaaaaaaaa aaaaaaaaaa aaa
//