LOCUS BC004953 2201 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens leucine rich repeat containing 41, mRNA (cDNA clone
IMAGE:3622774), partial cds.
ACCESSION BC004953
VERSION BC004953.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38569470.
FEATURES Location/Qualifiers
source 1..2201
/db_xref="H-InvDB:HIT000032107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3622774"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2201
/gene="LRRC41"
/gene_synonym="MUF1"
/gene_synonym="PP7759"
/db_xref="GeneID:10489"
CDS <1..1719
/gene="LRRC41"
/gene_synonym="MUF1"
/gene_synonym="PP7759"
/codon_start=1
/product="LRRC41 protein"
/protein_id="AAH04953.2"
/db_xref="GeneID:10489"
/translation="ALFILILTMSAGFWQPGPGGPPCRLCGEASRGRAPSRDEGSLLL
GSRRPRRDAAERCAAALMASRRKSEAKQMPRAAPATRVTRRSTQESLTAGGTDLKREL
HPPATSHEAPGTKRSPSAPAATSSASSSTSSYKRAPASSAPQPKPLKRFKRAAGKKGA
RTRQGPGAESEDLYDFVFIVAGEKEDGEEMEIGEVACGALDGSDPSCLGLPALEASQR
FRSISTLELFTVPLSTEAALTLCHLLSSWVSLESLTLSYNGLGSNIFRLLDSLRALSG
QAGCRLRALHLSDLFSPLPILELTRAIVRALPLLRVLSIRVDHPSQRDNPGVPGNAGP
PSHIIGDEEIPENCLEQLEMGFPRGAQPAPLLCSVLKASGSLQQLSLDSATFASPQDF
GLVLQTLKEYNLALKRLSFHDMNLADCQSEVLFLLQNLTLQEITFSFCRLFEKRPAQF
LPEMVAAMKGNSTLKGLRLPGNRLGNAGLLALADVFSEDSSSSLCQLDISSNCIKPDG
LLEFAKRLERWGRGAFGHLRLFQNWLDQDAVTAREAIRRLRATCHVVSDSWDSSQAFA
DYVSTM"
BASE COUNT 451 a 675 c 568 g 507 t
ORIGIN
1 gcccttttca tccttattct caccatgagt gctggcttct ggcaaccagg gcctggtggc
61 ccaccctgcc gcctctgtgg agaggcctcc cgaggccggg ccccatcccg agatgaaggg
121 tccctcttat tgggctcacg tcggccccgc cgggatgctg ctgagcgatg tgctgcagcc
181 ctgatggcca gccggcgtaa gagtgaagcc aagcagatgc ccagagctgc acctgccact
241 cgggtaacac gccggagcac acaggagagc ctgacagcag gcggaacaga ccttaagagg
301 gagctgcacc ccccagccac ctcccatgag gctcctggca ccaagcggtc accttctgct
361 ccagcagcca cctcctctgc ctcttcttct acatcctcat acaaacgggc accagctagc
421 tcagccccac agcctaagcc cctaaagcgt ttcaagcgag ctgcagggaa gaagggtgct
481 cgcacccgtc aggggcctgg tgcagagtct gaagacctgt atgacttcgt ttttattgtg
541 gctggcgaga aggaggatgg cgaagagatg gagattgggg aagtggcttg tggagctttg
601 gatggatcag atcccagctg cctggggctt ccagcactgg aagcttcaca aagattccgc
661 agcatctcca ccttggagct attcacagtt ccactctcca cagaggcagc cctgacacta
721 tgccacctgc tgagctcctg ggtgtcactg gagagcctca cactctccta caatggcctg
781 ggctctaaca tcttccgcct gctagacagc ctgcgggccc tgtcaggcca ggctggatgt
841 cgcctccgtg ccctgcatct cagtgacctg ttctcaccac tgcccatcct ggagctgaca
901 cgtgctatcg tgcgagcact gcccctgcta cgggtcctct ctattcgtgt tgaccaccca
961 agccagcggg acaaccctgg tgtgccaggg aatgcagggc cccctagcca cataataggc
1021 gatgaggaga taccagaaaa ctgcctggag cagttggaga tgggatttcc acggggagcc
1081 cagccagccc cactgctgtg ctccgttctg aaggcctcgg gttctctgca gcagctgtcc
1141 ctggatagtg ccacctttgc ctctccccag gattttgggc ttgttttgca aacactcaaa
1201 gagtacaacc tagccctgaa aagactgagc ttccatgaca tgaatctcgc tgactgtcag
1261 agcgaggtgc tctttttgct acagaatctg actctgcaag agattacctt ctccttctgc
1321 cgtctgtttg agaagcgccc agcccaattt ctgcctgaga tggttgctgc tatgaagggc
1381 aactccacac tgaagggcct ccggctgcca gggaaccgcc tggggaatgc tggcctgctg
1441 gccttggcag atgttttctc agaggattca tcctcctctc tctgtcagct ggacatcagt
1501 tccaactgca tcaagccaga tgggcttctg gagttcgcca agcggctgga gcgctggggc
1561 cgtggagcct ttggtcacct gcgcctcttc caaaactggc tggaccagga tgcagtcaca
1621 gccagggaag ccatccggcg gctccgggct acctgccatg tggttagcga ctcatgggac
1681 tcatcccagg ccttcgcaga ttatgttagc accatgtgat ggggcccgta cctcacagtc
1741 tcatgctcgg taccatcagc ttgcaggggc tgaagcatgg gctgcccaga accccaacca
1801 ccagttctat ctttctcttt ctgtcacctt ttttctcttt tttccttctt cccttgcact
1861 gaggtcctgg aggccttgat gaggcccagc aaacaggcat tctcacagct gggtttatag
1921 tctttgggcc ccttactcag tatcctggga accctgggcc aggaggttac agtggtcatc
1981 ataattgctg aagagatccc ctcccctgcc cctgggttcc tgccttccct cctcaagcag
2041 gcacccaggc tttagagaag tatagggggc ttcttccctg ctgggcttac cacactgctc
2101 tcaggcctca aaccctttca tacctttatt ctttttttta accaaaaaag tttttcttat
2161 aaaataaatt ttgggcaaac atcaaaaaaa aaaaaaaaaa a
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