LOCUS BC004949 1558 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:10851
IMAGE:3617714), complete cds.
ACCESSION BC004949
VERSION BC004949.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1558)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1558)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31880337.
FEATURES Location/Qualifiers
source 1..1558
/db_xref="H-InvDB:HIT000032104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10851 IMAGE:3617714"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1558
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 81..1430
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH04949.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 361 a 414 c 389 g 394 t
ORIGIN
1 cttggtagtc tgttagtggg agatccttgt tgccgtccct tcgcctcctt caccgccgca
61 gaccccttca agttctagtc atgcgtgagt gcatctccat ccacgttggc caggctggtg
121 tccagattgg caatgcctgc tgggagctct actgcctgga acacggcatc cagcccgatg
181 gccagatgcc aagtgacaag accattgggg gaggagatga ttccttcaac accttcttca
241 gtgaaacggg tgctggcaag catgtgcccc gggcagtgtt tgtagacttg gaacccacag
301 tcattgatga agttcgcact ggcacctacc gccagctctt ccaccctgag cagctcatca
361 caggcaagga agatgctgcc aataactatg cccgagggca ctacaccatt ggcaaggaga
421 tcattgacct cgtgttggac cgaattcgca agctggctga ccagtgcacc ggtcttcagg
481 gcttcttggt tttccacagc tttggtgggg gaactggttc tgggttcacc tcgctgctca
541 tggaacgtct ctcagttgat tatggcaaga agtccaagct ggagttctct atttacccgg
601 cgccccaggt ttccacagct gtagttgagc cctacaactc catcctcacc acccacacca
661 ccctggagca ctctgattgt gccttcatgg tagacaatga ggccatctat gacatctgtc
721 gtagaaacct cgatatcgag cgcccaacct acactaacct taaccgcctt attagccaga
781 ttgtgtcctc catcactgct tccctgagat ttgatggagc cctgaatgtt gacctgacag
841 aattccagac caacctggtg ccctaccccc gcatccactt ccctctggcc acatatgccc
901 ctgtcatctc tgctgagaaa gcctaccatg aacagcttac tgtagcagag atcaccaatg
961 cttgctttga gccagccaac cagatggtga aatgtgaccc tcgccatggt aaatacatgg
1021 cttgctgcct gttataccgt ggtgacgtgg ttcccaaaga tgtcaatgct gccattgcca
1081 ccatcaaaac caagcgtacc atccagtttg tggattggtg ccccactggc ttcaaggttg
1141 gcattaatta ccagcctccc actgtggtgc ctggcggaga cctggccaag gtacagagag
1201 ctgtgtgcat gctgagcaat accacagctg ttgctgaggc ctgggctcgc ctggaccaca
1261 agtttgacct gatgtatgcc aagcgtgcct ttgttcactg gtacgtgggt gaggggatgg
1321 aggaaggcga gttttcagag gcccgtgagg acatggctgc ccttgagaag gattatgagg
1381 aggttggagc agatagtgct gacggagagg atgagggtga agagtattaa cctgtgtgct
1441 gtacttttac actcctttgt cttggaactg tcttattttt gttctgtaaa tgtctattgc
1501 cgtaaattgt taataaaatt gatgtttcca ttttaaaaaa aaaaaaaaaa aaaaaaaa
//