LOCUS BC004453 2125 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3A, mRNA
(cDNA clone MGC:4303 IMAGE:2819400), complete cds.
ACCESSION BC004453
VERSION BC004453.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2125)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2125)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47519823.
FEATURES Location/Qualifiers
source 1..2125
/db_xref="H-InvDB:HIT000031958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4303 IMAGE:2819400"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2125
/gene="HTR3A"
/gene_synonym="5-HT-3"
/gene_synonym="5-HT3A"
/gene_synonym="5-HT3R"
/gene_synonym="5HT3R"
/db_xref="GeneID:3359"
/db_xref="HGNC:HGNC:5297"
/db_xref="MIM:182139"
CDS 120..1556
/gene="HTR3A"
/gene_synonym="5-HT-3"
/gene_synonym="5-HT3A"
/gene_synonym="5-HT3R"
/gene_synonym="5HT3R"
/codon_start=1
/product="5-hydroxytryptamine (serotonin) receptor 3A"
/protein_id="AAH04453.2"
/db_xref="GeneID:3359"
/db_xref="HGNC:HGNC:5297"
/db_xref="MIM:182139"
/translation="MLLWVQQALLALLLPTLLAQGEARRSRNTTRPALLRLSDYLLTN
YRKGVRPVRDWRKPTTVSIDVIVYAILNVDEKNQVLTTYIWYRQYWTDEFLQWNPEDF
DNITKLSIPTDSIWVPDILINEFVDVGKSPNIPYVYIRHQGEVQNYKPLQVVTACSLD
IYNFPFDVQNCSLTFTSWLHTIQDINISLWRLPEKVKSDRSVFMNQGEWELLGVLPYF
REFSMESSNYYAEMKFYVVIRRRPLFYVVSLLLPSIFLMVMDIVGFYLPPNSGERVSF
KITLLLGYSVFLIIVSDTLPATAIGTPLIGVYFVVCMALLVISLAETIFIVRLVHKQD
LQQPVPAWLRHLVLERIAWLLCLREQSTSQRPPATSQATKTDDCSAMGNHCSHMGGPQ
DFEKSPRDRCSPPPPPREASLAVCGLLQELSSIRQFLEKRDEIREVARDWLRVGSVLD
KLLFHIYLLAVLAYSITLVMLWSIWQYA"
BASE COUNT 473 a 614 c 554 g 484 t
ORIGIN
1 gcagtggcca cgagaggcag gctggctggg acatgaggtt ggcagagggc aggcaagctg
61 gcccttggtg ggcctcgtcc tgagcactcg gaggcactcc tatgcttgga aagctcgcta
121 tgctgctgtg ggtccagcag gcgctgctcg ccttgctcct ccccacactc ctggcacagg
181 gagaagccag gaggagccga aacaccacca ggcccgctct gctgaggctg tcggattacc
241 ttttgaccaa ctacaggaag ggtgtgcgcc ccgtgaggga ctggaggaag ccaaccaccg
301 tatccattga cgtcattgtc tatgccatcc tcaacgtgga tgagaagaat caggtgctga
361 ccacctacat ctggtaccgg cagtactgga ctgatgagtt tctccagtgg aaccctgagg
421 actttgacaa catcaccaag ttgtccatcc ccacggacag catctgggtc ccggacattc
481 tcatcaatga gttcgtggat gtggggaagt ctccaaatat cccgtacgtg tatattcggc
541 atcaaggcga agttcagaac tacaagcccc ttcaggtggt gactgcctgt agcctcgaca
601 tctacaactt ccccttcgat gtccagaact gctcgctgac cttcaccagt tggctgcaca
661 ccatccagga catcaacatc tctttgtggc gcttgccaga aaaggtgaaa tccgacagga
721 gtgtcttcat gaaccaggga gagtgggagt tgctgggggt gctgccctac tttcgggagt
781 tcagcatgga aagcagtaac tactatgcag aaatgaagtt ctatgtggtc atccgccggc
841 ggcccctctt ctatgtggtc agcctgctac tgcccagcat cttcctcatg gtcatggaca
901 tcgtgggctt ctacctgccc cccaacagtg gcgagagggt ctctttcaag attacactcc
961 tcctgggcta ctcggtcttc ctgatcatcg tttctgacac gctgccggcc actgccatcg
1021 gcactcctct cattggtgtc tactttgtgg tgtgcatggc tctgctggtg ataagtttgg
1081 ccgagaccat cttcattgtg cggctggtgc acaagcaaga cctgcagcag cccgtgcctg
1141 cttggctgcg tcacctggtt ctggagagaa tcgcctggct actttgcctg agggagcagt
1201 caacttccca gaggccccca gccacctccc aagccaccaa gactgatgac tgctcagcca
1261 tgggaaacca ctgcagccac atgggaggac cccaggactt cgagaagagc ccgagggaca
1321 gatgtagccc tcccccacca cctcgggagg cctcgctggc ggtgtgtggg ctgctgcagg
1381 agctgtcctc catccggcaa ttcctggaaa agcgggatga gatccgagag gtggcccgag
1441 actggctgcg cgtgggctcc gtgctggaca agctgctatt ccacatttac ctgctggcgg
1501 tgctggccta cagcatcacc ctggttatgc tctggtccat ctggcagtac gcttgagtgg
1561 gtacagccca gtggaggagg gggtacagtc ctggttaggt ggggacagag gatttctgct
1621 taggcccctc aggacccagg gaatgccagg gacattttca agacacagac aaagtcccgt
1681 gccctgtttc caatgccaat tcatctcagc aatcacaagc caaggtctga acccttccac
1741 caaaaactgg gtgttcaagg cccttacacc cttgtcccac ccccagcagc tcaccatggc
1801 tttaaaacat gctctcttag atcaggagaa actcgggcac tccctaagtc cactctagtt
1861 gtggactttt ccccattgac cctcacctga ataagggact ttggaattct gcttctcttt
1921 cacaactttg cttttaggtt gaaggcaaaa ccaactctct actacacagg cctgataact
1981 ctgtacgagg cttctctaac ccctagtgtc ttttttttct tcacctcact tgtggcagct
2041 tccctgaaca ctcatccccc atcagatgat gggagtggga agaataaaat gcagtgaaac
2101 cctaaaaaaa aaaaaaaaaa aaaaa
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