LOCUS BC004443 1294 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 31kDa, V1 subunit
E1, mRNA (cDNA clone MGC:4040 IMAGE:2820930), complete cds.
ACCESSION BC004443
VERSION BC004443.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1294)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1294)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913433.
FEATURES Location/Qualifiers
source 1..1294
/db_xref="H-InvDB:HIT000031949"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4040 IMAGE:2820930"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1294
/gene="ATP6V1E1"
/gene_synonym="ATP6E2"
/gene_synonym="P31"
/gene_synonym="Vma4"
/db_xref="GeneID:529"
/db_xref="HGNC:HGNC:857"
/db_xref="MIM:108746"
CDS 90..770
/gene="ATP6V1E1"
/gene_synonym="ATP6E2"
/gene_synonym="P31"
/gene_synonym="Vma4"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 31kDa, V1
subunit E1"
/protein_id="AAH04443.1"
/db_xref="GeneID:529"
/db_xref="HGNC:HGNC:857"
/db_xref="MIM:108746"
/translation="MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGR
LVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRL
SKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATK
NDVDVQIDQESYLPEDIAGGVEIYNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGA
NANRKFLD"
BASE COUNT 377 a 285 c 308 g 324 t
ORIGIN
1 cgcaggggtt ccctttgccg atttctctca cctcaccttt caaacctaaa ctcgagccta
61 ctgttcaccg gcctagcatt gctctcgcca tggctctcag cgatgctgac gtgcaaaagc
121 agataaagca tatgatggct ttcattgaac aagaagccaa tgagaaagca gaagaaatag
181 atgcaaaggc agaagaagag ttcaacatag agaaaggtcg gcttgtgcaa acccaaagac
241 taaagattat ggaatattat gagaagaaag agaaacagat tgagcagcag aagaaaattc
301 agatgtccaa tttgatgaat caagcgagac tcaaagtcct cagagcaaga gatgacctta
361 tcacagacct actaaatgaa gcaaaacaga gactcagcaa ggtggtaaaa gatacaacca
421 ggtaccaagt gctgctggat ggactggttc tccagggttt gtaccagttg ctggagcccc
481 gaatgattgt tcgttgcagg aaacaagatt tccctctggt aaaggctgca gtgcagaagg
541 caattcctat gtacaaaatt gccaccaaaa acgatgttga tgtccaaatt gaccaggagt
601 cctacctgcc tgaagacata gctggtggag ttgagatcta taatggagat cgtaaaataa
661 aggtttccaa caccctggaa agccggctgg atctcatagc ccagcagatg atgccagaag
721 tccggggagc cttgtttggt gcaaatgcca acaggaagtt tttggactaa gccttcagga
781 ggtggagctc gtcgtcagct ctcctgctgt gatgtggaag cttctgatat ttgaagaaac
841 acgaatgtct ctgtagcttc ctcttcactg ccccagtatt gctctgtatt tatcagcgat
901 gcccctctgt cactcatgcc ttgcctaatt gttcacaatg gtggaaagct tcatgtaata
961 tgatcaggac ccacctccag ttcttctgaa agtgtgacag tgtccagccg gttctgcagc
1021 actaggggag ggggcagatg gtggttgcat gggcttcctg ggtctccact ctccgtctgg
1081 cctaaaggtg atgtatttgg tgtttggccc tgcagtcccc actcttgagg cttaaggcgc
1141 atgtggcaca ccactccttc cagcagtagt cgctttactg ttacctgttt aggcctagaa
1201 gttttccctc atctgtaaat gtgatttaaa atctaagcca tgaatatgct ttatttatta
1261 aaagagttat gcggaaaaaa aaaaaaaaaa aaaa
//