LOCUS BC004419 2011 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens vacuolar protein sorting 24 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:11028 IMAGE:3660116), complete cds.
ACCESSION BC004419
VERSION BC004419.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2011)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2011)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: j Column: 24.
FEATURES Location/Qualifiers
source 1..2011
/db_xref="H-InvDB:HIT000031926"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11028 IMAGE:3660116"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2011
/gene="VPS24"
/gene_synonym="CGI-149"
/gene_synonym="CHMP3"
/gene_synonym="NEDF"
/db_xref="GeneID:51652"
/db_xref="HGNC:HGNC:29865"
/db_xref="MIM:610052"
CDS 48..716
/gene="VPS24"
/gene_synonym="CGI-149"
/gene_synonym="CHMP3"
/gene_synonym="NEDF"
/codon_start=1
/product="vacuolar protein sorting 24 homolog (S.
cerevisiae)"
/protein_id="AAH04419.1"
/db_xref="GeneID:51652"
/db_xref="HGNC:HGNC:29865"
/db_xref="MIM:610052"
/translation="MGLFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKV
KRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAG
SLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEE
AEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGAMAASEDEEEEEEALEAMQSRLA
TLRS"
BASE COUNT 554 a 406 c 530 g 521 t
ORIGIN
1 gcgcggggaa ctgaaagccg gaaggggcaa gacgggttca gttcgtcatg gggctgtttg
61 gaaagaccca ggagaagccg cccaaagaac tggtcaatga gtggtcattg aagataagaa
121 aggaaatgag agttgttgac aggcaaataa gggatatcca aagagaagaa gaaaaagtga
181 aacgatctgt gaaagatgct gccaagaagg gccagaagga tgtctgcata gttctggcca
241 aggagatgat caggtcaagg aaggctgtga gcaagctgta tgcatccaaa gcacacatga
301 actcagtgct catggggatg aagaaccagc tcgcggtctt gcgagtggct ggttccctgc
361 agaagagcac agaagtgatg aaggccatgc aaagtcttgt gaagattcca gagattcagg
421 ccaccatgag ggagttgtcc aaagaaatga tgaaggctgg gatcatagag gagatgttag
481 aggacacttt tgaaagcatg gacgatcagg aagaaatgga ggaagaagca gaaatggaaa
541 ttgacagaat tctctttgaa attacagcag gggccttggg caaagcaccc agtaaagtga
601 ctgatgccct tccagagcca gaacctccag gagcgatggc tgcctcagag gatgaggagg
661 aggaggaaga ggctctggag gccatgcagt cccggctggc cacactccgc agctaggggc
721 tgcctacccc gctgggtgtg cacacactcc tctcaagagc tgccatttta tgtgtctctt
781 gcactacacc tctgttgtga ggactaccat tttggagaag gttctgtttg tctcttttca
841 ttctctgccc aggttttggg atcgcaaagg gattgttctt ataaaagtgg cataaataaa
901 tgcatcattt ttaggagtat agacagatat atcttattgt ggggagggga aagaaatcca
961 tctgctcatg aagcacttct gaaaatatag gtgattgcct gaatgtcgaa gactctactt
1021 ttgtctataa aacactatat aaatgaattt taataaattt ttgctttagc acttggcccc
1081 attgtagatt gccctgtgca gtaaactttc aaggtgtcgg ctgccccaga ttgcttcatt
1141 tgctgggtgt ggaaagagtt gctatggcca ggcatatggg atttggaagc tcagcagaag
1201 tgacttctgc tctgtggttg ctgctccccg gctttcacag acatggtatg gcagccattc
1261 ttttatctat ttaaccaaga ggatgctggg gaattgtgct gcttgtcctg ttggctggtg
1321 gctgcattat gtcctggggt gtgcatgtgg gtctatttag agcttctgtc ccttccttcc
1381 cattgcaagt tgcacccaga tgagacagct gtagtactag gtctctttca cctctcattg
1441 cctgtccctg cttcgagctg gttgtcttgt gcgtgggaca tgggccttcc tatctgtgtt
1501 ttctcaaagt caggagctga ccaggagcac actaaggtgt ggtcatgcat cataaccaac
1561 attcactcat ctgggacatt cttaagatac atttataaat catttcagca gtagtacttt
1621 gtatgtgttg agagtttaca gagctctttg acatacgcga tcttagtctt tacaaataag
1681 gaaaacagct cagtttggga agtatcagag atgggattca aacccagatc ctctggtcca
1741 agttgtatgt gcactgaact aatcaggcag gaaaaaagcc cagccactgt ctcacagatt
1801 gttttttgta tattgtagca aaatcctgaa acaatggggt ccttccagtc tcatcataca
1861 aaatggcaat cttggctggg tgcggtggtt catgcctata atcccagtgc tttacaaggc
1921 tgaggcagga ggctctcttg agaataggag ttcaagacca gcctgggcaa catagcaaga
1981 tcctgtctct ccaaaaaaaa aaaaaaaaaa a
//