LOCUS BC004402 1582 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparagine-linked glycosylation 1,
beta-1,4-mannosyltransferase homolog (S. cerevisiae), mRNA (cDNA
clone MGC:1099 IMAGE:3510605), complete cds.
ACCESSION BC004402
VERSION BC004402.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1582)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1582)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: i Column: 1.
FEATURES Location/Qualifiers
source 1..1582
/db_xref="H-InvDB:HIT000031917"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1099 IMAGE:3510605"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1582
/gene="ALG1"
/gene_synonym="HMAT1"
/gene_synonym="HMT-1"
/gene_synonym="HMT1"
/db_xref="GeneID:56052"
/db_xref="HGNC:HGNC:18294"
/db_xref="MIM:605907"
CDS 9..1403
/gene="ALG1"
/gene_synonym="HMAT1"
/gene_synonym="HMT-1"
/gene_synonym="HMT1"
/codon_start=1
/product="asparagine-linked glycosylation 1,
beta-1,4-mannosyltransferase homolog (S. cerevisiae)"
/protein_id="AAH04402.1"
/db_xref="GeneID:56052"
/db_xref="HGNC:HGNC:18294"
/db_xref="MIM:605907"
/translation="MAASCLVLLALCLLLPLLLLGGWKRWRRGRAARHVVAVVLGDVG
RSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGLTELQSLAVGPRVFQ
YGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLCGSKLVIDWHNYG
YSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVTNAMREDLADNWHIRAVTVYDKP
ASFFKETPLDLQHRLFMKLGSMHSPFRARSEPEDPVTERSAFTERDAGNGLVTRLRER
PALLVSSTSWTEDEDFSILLAALEKFEQLTLDGHNLPSLVCVITGKGPLREYYSRLIH
QKHFQHIQVCTPWLEAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCCLPVCAV
NFKCLHELVKHEENGLVFEDSEELAAQLQMLFSNFPDPAGKLNQFRKNLRESQQLRWD
ESWVQTVLPLVMDT"
BASE COUNT 328 a 435 c 460 g 359 t
ORIGIN
1 cagccaagat ggcggcctca tgcttggtcc tgctggcgct gtgtctgctg ctgccgctgc
61 tgctgctggg aggatggaag cgctggcgcc gggggcgggc ggcccggcat gtagtagcgg
121 tggtgctggg cgacgtgggc cgcagccccc gtatgcagta ccacgcgctg tcgttggcca
181 tgcacggctt ctcggtgacc ctcctggggt tctgcaactc caaaccccat gatgagctct
241 tgcagaacaa cagaattcag attgtggggt tgacagaact tcagagtctt gcagttgggc
301 cccgagtttt ccagtacgga gtcaaagttg tacttcaggc tatgtacttg ctgtggaagt
361 tgatgtggag ggagccaggt gcctatatct ttctccagaa ccccccaggt ctgcctagca
421 ttgctgtctg ctggttcgtg ggctgccttt gtggaagcaa gctcgtcatt gactggcaca
481 actatggcta ctccatcatg ggtctggtgc atggccccaa ccatcccctc gttctgctgg
541 ccaagtggta cgagaagttc tttgggcgcc tgtcccacct gaacctgtgt gttaccaatg
601 ctatgcgaga agacctggcg gataactggc acatcagggc tgtgaccgtc tacgacaagc
661 ccgcatcttt ctttaaagag acacctctgg acctgcagca ccggctcttc atgaagctgg
721 gcagcatgca ctctccgttc agggcccgct cagaacctga ggacccagtc acggagcggt
781 cggccttcac ggagcgggat gctgggaacg ggctggtgac gcgtctccgt gagcggccag
841 ccctgctggt cagcagcacg agctggacag aggacgaaga cttctccatc ctgctggcag
901 ctttagaaaa gtttgaacaa ctgactcttg atggacacaa ccttccttct ctcgtctgtg
961 tgataacagg caaagggcct ctgagggagt attatagccg cctcatccac cagaagcact
1021 tccagcacat ccaggtctgc accccctggc tggaggccga ggactacccc ctgcttctag
1081 ggtcggcgga cctgggtgtc tgtctgcaca cgtcctccag tggcctggac ctgcccatga
1141 aggtggtgga catgttcggg tgctgtttgc ctgtgtgtgc tgtgaacttc aagtgtttac
1201 atgagctggt gaaacatgaa gaaaatggcc tggtctttga ggactcagag gaactggcag
1261 ctcagctgca gatgcttttc tcaaactttc ctgatcctgc gggcaagcta aaccagttcc
1321 ggaagaacct gcgggagtcg cagcagctcc gatgggatga gagctgggtg cagactgtgc
1381 tccctttggt tatggacaca taactcctgg gccagaggct ataaaacccc aggacccctg
1441 ctgtccttcc cgcagcttct tcttggagtc tcagggcaaa ccctttcgag cagcacctcc
1501 cagtggccag aagctgaaat gacagcagtg gtactgcctg gtaaaagaat tggttctgtg
1561 aaaaaaaaaa aaaaaaaaaa aa
//