LOCUS BC004370 1718 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 3 family, memberA1, mRNA (cDNA
clone MGC:10406 IMAGE:3622758), complete cds.
ACCESSION BC004370
VERSION BC004370.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907048.
FEATURES Location/Qualifiers
source 1..1718
/db_xref="H-InvDB:HIT000031895"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10406 IMAGE:3622758"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1718
/gene="ALDH3A1"
/gene_synonym="ALDHIII"
/gene_synonym="MGC10406"
/db_xref="GeneID:218"
/db_xref="HGNC:HGNC:405"
/db_xref="MIM:100660"
CDS 33..1394
/gene="ALDH3A1"
/gene_synonym="ALDHIII"
/gene_synonym="MGC10406"
/codon_start=1
/product="aldehyde dehydrogenase 3 family, memberA1"
/protein_id="AAH04370.1"
/db_xref="GeneID:218"
/db_xref="HGNC:HGNC:405"
/db_xref="MIM:100660"
/translation="MSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQEL
VGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHS
EPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDK
DLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCY
VDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDA
KKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEE
IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVI
VHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAKM
TQH"
BASE COUNT 442 a 505 c 482 g 289 t
ORIGIN
1 cagttaccgg gagaggctgt gtcaaaggcg ccatgagcaa gatcagcgag gccgtgaagc
61 gcgcccgcgc cgccttcagc tcgggcagga cccgtccgct gcagttccgg atccagcagc
121 tggaggcgct gcagcgcctg atccaggagc aggagcagga gctggtgggc gcgctggccg
181 cagacctgca caagaatgaa tggaacgcct actatgagga ggtggtgtac gtcctagagg
241 agatcgagta catgatccag aagctccctg agtgggccgc ggatgagccc gtggagaaga
301 cgccccagac tcagcaggac gagctctaca tccactcgga gccactgggc gtggtcctcg
361 tcattggcac ctggaactac cccttcaacc tcaccatcca gcccatggtg ggcgccatcg
421 ctgcagggaa cgcagtggtc ctcaagccct cggagctgag tgagaacatg gcgagcctgc
481 tggctaccat catcccccag tacctggaca aggatctgta cccagtaatc aatgggggtg
541 tccctgagac cacggagctg ctcaaggaga ggttcgacca tatcctgtac acgggcagca
601 cgggggtggg gaagatcatc atgacggctg ctgccaagca cctgacccct gtcacgctgg
661 agctgggagg gaagagtccc tgctacgtgg acaagaactg tgacctggac gtggcctgcc
721 gacgcatcgc ctgggggaaa ttcatgaaca gtggccagac ctgcgtggcc ccagactaca
781 tcctctgtga cccctcgatc cagaaccaaa ttgtggagaa gctcaagaag tcactgaaag
841 agttctacgg ggaagatgct aagaaatccc gggactatgg aagaatcatt agtgcccggc
901 acttccagag ggtgatgggc ctgattgagg gccagaaggt ggcttatggg ggcaccgggg
961 atgccgccac tcgctacata gcccccacca tcctcacgga cgtggacccc cagtccccgg
1021 tgatgcaaga ggagatcttc gggcctgtgc tgcccatcgt gtgcgtgcgc agcctggagg
1081 aggccatcca gttcatcaac cagcgtgaga agcccctggc cctctacatg ttctccagca
1141 acgacaaggt gattaagaag atgattgcag agacatccag tggtggggtg gcggccaacg
1201 atgtcatcgt ccacatcacc ttgcactctc tgcccttcgg gggcgtgggg aacagcggca
1261 tgggatccta ccatggcaag aagagcttcg agactttctc tcaccgccgc tcttgcctgg
1321 tgaggcctct gatgaatgat gaaggcctga aggtcagata ccccccgagc ccggccaaga
1381 tgacccagca ctgaggaggg gttgctccgc ctggcctggc catactgtgt cccatcggag
1441 tgcggaccac cctcactggc tctcctggcc ctgggagaat cgctcctgca gccccagccc
1501 agccccactc ctctgctgac ctgctgacct gtgcacaccc cactcccaca tgggcccagg
1561 cctcaccatt ccaagtctcc acccctttct agaccaataa agagacaaat acaattttct
1621 aactcagcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aacccccg
//