LOCUS BC004348 3014 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens interleukin 21 receptor, mRNA (cDNA clone MGC:10967
IMAGE:3634520), complete cds.
ACCESSION BC004348
VERSION BC004348.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3014)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3014)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31083186.
FEATURES Location/Qualifiers
source 1..3014
/db_xref="H-InvDB:HIT000031877"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10967 IMAGE:3634520"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3014
/gene="IL21R"
/gene_synonym="MGC10967"
/gene_synonym="NILR"
/db_xref="GeneID:50615"
/db_xref="HGNC:HGNC:6006"
/db_xref="MIM:605383"
CDS 86..1702
/gene="IL21R"
/gene_synonym="MGC10967"
/gene_synonym="NILR"
/codon_start=1
/product="interleukin 21 receptor"
/protein_id="AAH04348.1"
/db_xref="GeneID:50615"
/db_xref="HGNC:HGNC:6006"
/db_xref="MIM:605383"
/translation="MPRGWAAPLLLLLLQGGWGCPDLVCYTDYLQTVICILEMWNLHP
STLTLTWQDQYEELKDEATSCSLHRSAHNATHATYTCHMDVFHFMADDIFSVNITDQS
GNYSQECGSFLLAESIKPAPPFNVTVTFSGQYNISWRSDYEDPAFYMLKGKLQYELQY
RNRGDPWAVSPRRKLISVDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWS
DPVIFQTQSEELKEGWNPHLLLLLLLVIVFIPAFWSLKTHPLWRLWKKIWAVPSPERF
FMPLYKGCSGDFKKWVGAPFTGSSLELGPWSPEVPSTLEVYSCHPPRSPAKRLQLTEL
QEPAELVESDGVPKPSFWPTAQNSGGSAYSEERDRPYGLVSIDTVTVLDAEGPCTWPC
SCEDDGYPALDLDAGLEPSPGLEDPLLDAGTTVLSCGCVSAGSPGLGGPLGSLLDRLK
PPLADGEDWAGGLPWGGRSPGGVSESEAGSPLAGLDMDTFDSGFVGSDCSSPVECDFT
SPGDEGPPRSYLRQWVVIPPPLSSPGPQAS"
BASE COUNT 647 a 872 c 860 g 635 t
ORIGIN
1 cccccagaag cccatcagac tgcccccagc acacggaatg gatttctgag aaagaagccg
61 aaacagaagg cccgtgggag tcagcatgcc gcgtggctgg gccgccccct tgctcctgct
121 gctgctccag ggaggctggg gctgccccga cctcgtctgc tacaccgatt acctccagac
181 ggtcatctgc atcctggaaa tgtggaacct ccaccccagc acgctcaccc ttacctggca
241 agaccagtat gaagagctga aggacgaggc cacctcctgc agcctccaca ggtcggccca
301 caatgccacg catgccacct acacctgcca catggatgta ttccacttca tggccgacga
361 cattttcagt gtcaacatca cagaccagtc tggcaactac tcccaggagt gtggcagctt
421 tctcctggct gagagcatca agccggctcc ccctttcaac gtgactgtga ccttctcagg
481 acagtataat atctcctggc gctcagatta cgaagaccct gccttctaca tgctgaaggg
541 caagcttcag tatgagctgc agtacaggaa ccggggagac ccctgggctg tgagtccgag
601 gagaaagctg atctcagtgg actcaagaag tgtctccctc ctccccctgg agttccgcaa
661 agactcgagc tatgagctgc aggtgcgggc agggcccatg cctggctcct cctaccaggg
721 gacctggagt gaatggagtg acccggtcat ctttcagacc cagtcagagg agttaaagga
781 aggctggaac cctcacctgc tgcttctcct cctgcttgtc atagtcttca ttcctgcctt
841 ctggagcctg aagacccatc cattgtggag gctatggaag aagatatggg ccgtccccag
901 ccctgagcgg ttcttcatgc ccctgtacaa gggctgcagc ggagacttca agaaatgggt
961 gggtgcaccc ttcactggct ccagcctgga gctgggaccc tggagcccag aggtgccctc
1021 caccctggag gtgtacagct gccacccacc acggagcccg gccaagaggc tgcagctcac
1081 ggagctacaa gaaccagcag agctggtgga gtctgacggt gtgcccaagc ccagcttctg
1141 gccgacagcc cagaactcgg ggggctcagc ttacagtgag gagagggatc ggccatacgg
1201 cctggtgtcc attgacacag tgactgtgct agatgcagag gggccatgca cctggccctg
1261 cagctgtgag gatgacggct acccagccct ggacctggat gctggcctgg agcccagccc
1321 aggcctagag gacccactct tggatgcagg gaccacagtc ctgtcctgtg gctgtgtctc
1381 agctggcagc cctgggctag gagggcccct gggaagcctc ctggacagac taaagccacc
1441 ccttgcagat ggggaggact gggctggggg actgccctgg ggtggccggt cacctggagg
1501 ggtctcagag agtgaggcgg gctcacccct ggccggcctg gatatggaca cgtttgacag
1561 tggctttgtg ggctctgact gcagcagccc tgtggagtgt gacttcacca gccccgggga
1621 cgaaggaccc ccccggagct acctccgcca gtgggtggtc attcctccgc cactttcgag
1681 ccctggaccc caggccagct aatgaggctg actggatgtc cagagctggc caggccactg
1741 ggccctgagc cagagacaag gtcacctggg ctgtgatgtg aagacacctg cagcctttgg
1801 tctcctggat gggcctttga gcctgatgtt tacagtgtct gtgtgtgtgt gtgcatatgt
1861 gtgtgtgtgc atatgcatgt gtgtgtgtgt gtgtgtctta ggtgcgcagt ggcatgtcca
1921 cgtgtgtgtg tgattgcacg tgcctgtggg cctgggataa tgcccatggt actccatgca
1981 ttcacctgcc ctgtgcatgt ctggactcac ggagctcacc catgtgcaca agtgtgcaca
2041 gtaaacgtgt ttgtggtcaa cagatgacaa cagccgtcct ccctcctagg gtcttgtgtt
2101 gcaagttggt ccacagcatc tccggggctt tgtgggatca gggcattgcc tgtgactgag
2161 gcggagccca gccctccagc gtctgcctcc aggagctgca agaagtccat attgttcctt
2221 atcacctgcc aacaggaagc gaaaggggat ggagtgagcc catggtgacc tcgggaatgg
2281 caattttttg ggcggcccct ggacgaaggt ctgaatcccg actctgatac cttctggctg
2341 tgctacctga gccaagtcgc ctcccctctc tgggctagag tttccttatc cagacagtgg
2401 ggaaggcatg acacacctgg gggaaattgg cgatgtcacc cgtgtacggt acgcagccca
2461 gagcagaccc tcaataaacg tcagcttcct tccttctgcg gccagagccg aggcgggcgg
2521 gggtgagaac atcaatcgtc agcgacagcc tgggcacccg cggggccgtc ccgcctgcag
2581 agggccactc gggggggttt ccaggcttaa aatcagtccg tttcgtctct tggaaacagc
2641 tccccaccaa ccaagatttc tttttctaac ttctgctact aagtttttaa aaattccctt
2701 tatgcaccca agagatattt attaaacacc aattacgtag caggccatgg ctcatgggac
2761 ccaccccccg tggcactcat ggagggggct gcaggttgga actatgcagt gtgctccggc
2821 cacacatcct gctgggcccc ctaccctgcc ccaattcaat cctgccaata aatcctgtct
2881 tatttgttca tcctggagaa ttgaagggag gtcaagttgt ttgtcaatga tttgtcagag
2941 aacctgttga aatgtgaatt aagaagctaa gaaaataaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaa
//