LOCUS BC004327 1070 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens ras homolog gene family, member T2, mRNA (cDNA clone
IMAGE:3629896), partial cds.
ACCESSION BC004327
VERSION BC004327.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1070)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1070)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: o Column: 14.
FEATURES Location/Qualifiers
source 1..1070
/db_xref="H-InvDB:HIT000086339"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3629896"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1070
/gene="ARHT2"
/gene_synonym="MIRO-2"
/db_xref="GeneID:89941"
CDS <1..509
/gene="ARHT2"
/gene_synonym="MIRO-2"
/codon_start=3
/product="ARHT2 protein"
/protein_id="AAH04327.1"
/db_xref="GeneID:89941"
/translation="PGYAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFD
GSDPKSFAHCASVYKHHYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPV
PFSCAGPAEPSTTIFTQLATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSL
YRVLVKSQ"
misc_feature 36..299
/gene="ARHT2"
/gene_synonym="MIRO-2"
/note="ras; Region: Ras family. Includes sub-families Ras,
Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif
with GTP_EFTU, arf and myosin_head. See pfam00009
pfam00025, pfam00063. The high cutoff is so high to avoid
overlaps with related families"
/db_xref="CDD:pfam00071"
BASE COUNT 191 a 331 c 326 g 222 t
ORIGIN
1 ctcccggcta cgccatcgac acggtgcagg tcaatgggca ggagaagtac ttgatcctct
61 gtgaggtggg cacagatggt ctgctggcca catcgctgga cgccacctgt gacgttgcct
121 gcttgatgtt tgatggcagt gacccaaagt cctttgcaca ttgtgccagc gtctacaagc
181 accattacat ggacgggcag accccctgcc tctttgtctc ctccaaggcc gacctgcccg
241 aaggtgtcgc ggtgtctggc ccatcaccgg ccgagttttg ccgcaagcac cggctacccg
301 ctcccgtgcc gttctcctgt gctggcccag ccgagcccag caccaccatc ttcacccagc
361 tcgccaccat ggccgccttc ccacatttgg tccacgcaga gctgcatccc tcttccttct
421 ggctccgggg gctgctgggg gttgtcgggg ccgccgtggc cgcagtcctc agcttctcac
481 tctacagggt cctggtgaag agccagtgag gcccctggta cccaagcccc ctcccctgac
541 ctgggtgtgg ctcgctgctg gggctctgca ggggcagcac agctggggtg caggccaggc
601 tgccactccg ggaacgcctt tgcgccggga ctttttgttt ctgaaggcag tcgatctgca
661 gcggggcctt atgctgccat gcactgccct ggctcctgcc ggacccccag ggtgggccgt
721 ggcaggtggc tgagcaggag ctcccaagtg ccggccaccg ctgtcaggga ttgcccaccc
781 ctgggcatca tgtgtgtggg gccggggagc acaggtgtgg gagctggtga ccccagaccc
841 agaattctca gggctctacc cccctttcct ggtcctaggt ggccagtggg tatgaggagg
901 gctggaaggc agagctttgg gccaaaagca ggcgttgggg ggtcccccct caagtttgga
961 gccgtttccg tggttgtagc agaggaccgg aggttgggtt cctgattaaa cttcactgtg
1021 tgttttctat ctcggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//