LOCUS BC004275 2748 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens prosaposin, mRNA (cDNA clone MGC:10834 IMAGE:3615413),
complete cds.
ACCESSION BC004275
VERSION BC004275.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2748)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: n Column: 5.
FEATURES Location/Qualifiers
source 1..2748
/db_xref="H-InvDB:HIT000031837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10834 IMAGE:3615413"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2748
/gene="PSAP"
/db_xref="GeneID:5660"
/db_xref="HGNC:HGNC:9498"
/db_xref="MIM:176801"
CDS 14..1588
/gene="PSAP"
/codon_start=1
/product="prosaposin"
/protein_id="AAH04275.1"
/db_xref="GeneID:5660"
/db_xref="HGNC:HGNC:9498"
/db_xref="MIM:176801"
/translation="MYALFLLASLLGAALAGPVLGLKECTRGSAVWCQNVKTASDCGA
VKHCLQTVWNKPTVKSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNM
SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCESLQKHLAELNHQKQLESNKIP
ELDMTEVVAPFMANIPLLLYPQDGPRSKPQPKDNGDVCQDCIQMVTDIQTAVRTNSTF
VQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQPKEICALVGFCDEVKE
MPMQTLVPAKVASKNVIPALELVEPIKKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKT
EKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR
LPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQ
CDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTET
AAQCNAVEHCKRHVWN"
BASE COUNT 604 a 695 c 783 g 666 t
ORIGIN
1 gtcagacggc gctatgtacg ccctcttcct cctggccagc ctcctgggcg cggctctagc
61 cggcccggtc cttggactga aagaatgcac caggggctcg gcagtgtggt gccagaatgt
121 gaagacggcg tccgactgcg gggcagtgaa gcactgcctg cagaccgttt ggaacaagcc
181 aacagtgaaa tcccttccct gcgacatatg caaagacgtt gtcaccgcag ctggtgatat
241 gctgaaggac aatgccactg aggaggagat ccttgtttac ttggagaaga cctgtgactg
301 gcttccgaaa ccgaacatgt ctgcttcatg caaggagata gtggactcct acctccctgt
361 catcctggac atcattaaag gagaaatgag ccgtcctggg gaggtgtgct ctgctctcaa
421 cctctgcgag tctctccaga agcacctagc agagctgaat caccagaagc agctggagtc
481 caataagatc ccagagctgg acatgactga ggtggtggcc cccttcatgg ccaacatccc
541 tctcctcctc taccctcagg acggcccccg cagcaagccc cagccaaagg ataatgggga
601 cgtttgccag gactgcattc agatggtgac tgacatccag actgctgtac ggaccaactc
661 cacctttgtc caggccttgg tggaacatgt caaggaggag tgtgaccgcc tgggccctgg
721 catggccgac atatgcaaga actatatcag ccagtattct gaaattgcta tccagatgat
781 gatgcacatg caacccaagg agatctgtgc gctggttggg ttctgtgatg aggtgaaaga
841 gatgcccatg cagactctgg tccccgccaa agtggcctcc aagaatgtca tccctgccct
901 ggaactggtg gagcccatta agaagcacga ggtcccagca aagtctgatg tttactgtga
961 ggtgtgtgaa ttcctggtga aggaggtgac caagctgatt gacaacaaca agactgagaa
1021 agaaatactc gacgcttttg acaaaatgtg ctcgaagctg ccgaagtccc tgtcggaaga
1081 gtgccaggag gtggtggaca cgtacggcag ctccatcctg tccatcctgc tggaggaggt
1141 cagccctgag ctggtgtgca gcatgctgca cctctgctct ggcacgcggc tgcctgcact
1201 gaccgttcac gtgactcagc caaaggacgg tggcttctgc gaagtgtgca agaagctggt
1261 gggttatttg gatcgcaacc tggagaaaaa cagcaccaag caggagatcc tggctgctct
1321 tgagaaaggc tgcagcttcc tgccagaccc ttaccagaag cagtgtgatc agtttgtggc
1381 agagtacgag cccgtgctga tcgagatcct ggtggaggtg atggatcctt ccttcgtgtg
1441 cttgaaaatt ggagcctgcc cctcggccca taagcccttg ttgggaactg agaagtgtat
1501 atggggccca agctactggt gccagaacac agagacagca gcccagtgca atgctgtcga
1561 gcattgcaaa cgccatgtgt ggaactagga ggaggaatat tccatcttgg cagaaaccac
1621 agcattggtt tttttctact tgtgtgtctg ggggaatgaa cgcacagatc tgtttgactt
1681 tgttataaaa atagggctcc cccacctccc ccatttctgt gtcctttatt gtagcattgc
1741 tgtctgcaag ggagccccta gcccctggca gacatagctg cttcagtgcc ccttttctct
1801 ctgctagatg gatgttgatg cactggaggt cttttagcct gcccttgcat ggcgcctgct
1861 ggaggaggag agagctctgc tggcatgagc cacagtttct tgactggagg ccatcaaccc
1921 tcttggttga ggccttgttc tgagccctga catgtgcttg ggcactggtg ggcctgggct
1981 tctgaggtgg cctcctgccc tgatcaggga ccctccccgc tttcctgggc ctctcagttg
2041 aacaaagcag caaaacaaag gcagttttat atgaaagatt agaagcctgg aataatcagg
2101 ctttttaaat gatgtaattc ccactgtaat agcataggga ttttggaagc agctgctggt
2161 ggcttgggac atcagtgggg ccaagggttc tctgtccctg gttcaactgt gatttggctt
2221 tcccgtgtct ttcctggtga tgccttgttt ggggttctgt gggtttgggt gggaagaggg
2281 ccatctgcct gaatgtaacc tgctagctct ccgaaggccc tgcgggcctg gcttgtgtga
2341 gcgtgtggac agtggtggcc gcgctgtgcc tgctcgtgtt gcctacatgt ccctggctgt
2401 tgaggcgctg cttcagcctg cacccctccc ttgtctcata gatgctcctt ttgacctttt
2461 caaataaata tggatggcga gctcctaggc ctctggcttc ctggtagagg gcggcatgcc
2521 gaagggtctg ctgggtgtgg attggatgct ggggtgtggg ggttggaagc tgtctgtggc
2581 ccacttgggc acccacgctt ctgtccactt ctggttgcca ggagacagca agcaaagcca
2641 gcaggacatg aagttgctat taaatggact tcgtgatttt tgttttgcac taaagtttct
2701 gtgatttaac aataaaattc tgttagccag aaaaaaaaaa aaaaaaaa
//