LOCUS BC004274 678 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens H2A histone family, member V, mRNA (cDNA clone
MGC:10831 IMAGE:3615320), complete cds.
ACCESSION BC004274
VERSION BC004274.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 678)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 678)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: f Column: 5.
FEATURES Location/Qualifiers
source 1..678
/db_xref="H-InvDB:HIT000031836"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10831 IMAGE:3615320"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..678
/gene="H2AFV"
/db_xref="GeneID:94239"
/db_xref="HGNC:HGNC:20664"
CDS 8..394
/gene="H2AFV"
/codon_start=1
/product="H2A histone family, member V"
/protein_id="AAH04274.3"
/db_xref="GeneID:94239"
/db_xref="HGNC:HGNC:20664"
/translation="MAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSH
GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIK
ATIAGGGVIPHIHKSLIGKKGQQKTA"
BASE COUNT 205 a 132 c 171 g 170 t
ORIGIN
1 cgagaacatg gctggaggca aagctggaaa ggacagtggg aaggccaagg ctaaggcagt
61 atctcgctca cagagagctg ggctacagtt tcctgtgggc cgcatccaca gacacttgaa
121 gactcgcacc acaagccatg gaagggtggg tgccactgct gccgtgtaca gtgctgcgat
181 tctggagtac ctcactgcag aggtgctgga gctggcaggt aatgcttcta aggatctcaa
241 agtaaagcgt atcactccgc gtcacttgca gcttgcaatc cgtggtgatg aagagttgga
301 ttctcttatc aaggctacca tagctggggg tggtgtgatc cctcacatcc acaaatctct
361 gattggaaag aagggacagc agaaaactgc ttagagggat gctttaacca accctcttcc
421 tccccgtcat tgtactgtaa ctgggacaga agaaataatg gggatatgtg gaatttttaa
481 caacagttaa atggaaaagc atagacaatt actgtagaca tgataaaaga aacatttgta
541 tgttcttaga ctcgaagttt gataaaagta ccttttcatg tggtgacagt tgtgtgttga
601 ttggctaggt ttctcccgtg tgttttatac aaaaatggaa ttgataaacc attttttaca
661 aaaaaaaaaa aaaaaaaa
//