LOCUS BC004251 1811 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, beta, mRNA (cDNA clone MGC:10559
IMAGE:3623067), complete cds.
ACCESSION BC004251
VERSION BC004251.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1811)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1811)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: i Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5016088.
FEATURES Location/Qualifiers
source 1..1811
/db_xref="H-InvDB:HIT000031818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10559 IMAGE:3623067"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1811
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
CDS 62..1189
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/codon_start=1
/product="actin, beta"
/protein_id="AAH04251.1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
/translation="MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
BASE COUNT 411 a 529 c 451 g 420 t
ORIGIN
1 gcgagcacag agcctcgcct ttgccgatcc gccgcccgtc cacacccgcc gccagctcac
61 catggatgat gatatcgccg cgctcgtcgt cgacaacggc tccggcatgt gcaaggccgg
121 cttcgcgggc gacgatgccc cccgggccgt cttcccctcc atcgtggggc gccccaggca
181 ccagggcgtg atggtgggca tgggtcagaa ggattcctat gtgggcgacg aggcccagag
241 caagagaggc atcctcaccc tgaagtaccc catcgagcac ggcatcgtca ccaactggga
301 cgacatggag aaaatctggc accacacctt ctacaatgag ctgcgtgtgg ctcccgagga
361 gcaccccgtg ctgctgaccg aggcccccct gaaccccaag gccaaccgcg agaagatgac
421 ccagatcatg tttgagacct tcaacacccc agccatgtac gttgctatcc aggctgtgct
481 atccctgtac gcctctggcc gtaccactgg catcgtgatg gactccggtg acggggtcac
541 ccacactgtg cccatctacg aggggtatgc cctcccccat gccatcctgc gtctggacct
601 ggctggccgg gacctgactg actacctcat gaagatcctc accgagcgcg gctacagctt
661 caccaccacg gccgagcggg aaatcgtgcg tgacattaag gagaagctgt gctacgtcgc
721 cctggacttc gagcaagaga tggccacggc tgcttccagc tcctccctgg agaagagcta
781 cgagctgcct gacggccagg tcatcaccat tggcaatgag cggttccgct gccctgaggc
841 actcttccag ccttccttcc tgggcatgga gtcctgtggc atccacgaaa ctaccttcaa
901 ctccatcatg aagtgtgacg tggacatccg caaagacctg tacgccaaca cagtgctgtc
961 tggcggcacc accatgtacc ctggcattgc cgacaggatg cagaaggaga tcactgccct
1021 ggcacccagc acaatgaaga tcaagatcat tgctcctcct gagcgcaagt actccgtgtg
1081 gatcggcggc tccatcctgg cctcgctgtc caccttccag cagatgtgga tcagcaagca
1141 ggagtatgac gagtccggcc cctccatcgt ccaccgcaaa tgcttctagg cggactatga
1201 cttagttgcg ttacaccctt tcttgacaaa acctaacttg cgcagaaaac aagatgagat
1261 tggcatggct ttatttgttt tttttgtttt gttttggttt tttttttttt tttggcttga
1321 ctcaggattt aaaaactgga acggtgaagg tgacagcagt cggttggagc gagcatcccc
1381 caaagttcac aatgtggccg aggactttga ttgcacattg ttgttttttt aatagtcatt
1441 ccaaatatga gatgcgttgt tacaggaagt cccttgccat cctaaaagcc accccacttc
1501 tctctaagga gaatggccca gtcctctccc aagtccacac aggggaggtg atagcattgc
1561 tttcgtgtaa attatgtaat gcaaaatttt tttaatcttc gccttaatac ttttttattt
1621 tgttttattt tgaatgatga gccttcgtgc ccccccttcc cccttttttg tcccccaact
1681 tgagatgtat gaaggctttt ggtctccctg ggagtgggtg gaggcagcca gggcttacct
1741 gtacactgac ttgagaccag ttgaataaaa gtgcacacct taaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa a
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