LOCUS BC004200 2080 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens phosphoribosyl pyrophosphate amidotransferase, mRNA
(cDNA clone MGC:3674 IMAGE:3533162), complete cds.
ACCESSION BC004200
VERSION BC004200.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2080)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2080)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC004200.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29570797.
FEATURES Location/Qualifiers
source 1..2080
/db_xref="H-InvDB:HIT000031775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3674 IMAGE:3533162"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2080
/gene="PPAT"
/gene_synonym="ATASE"
/gene_synonym="GPAT"
/db_xref="GeneID:5471"
/db_xref="HGNC:HGNC:9238"
/db_xref="MIM:172450"
CDS 32..1585
/gene="PPAT"
/gene_synonym="ATASE"
/gene_synonym="GPAT"
/codon_start=1
/product="phosphoribosyl pyrophosphate amidotransferase"
/protein_id="AAH04200.1"
/db_xref="GeneID:5471"
/db_xref="HGNC:HGNC:9238"
/db_xref="MIM:172450"
/translation="MELEELGIREECGVFGCIASGEWPTQLDVPHVITLGLVGLQHRG
QESAGIVTSDGSSVPTFKSHKGMGLVNHVFTEDNLKKLYVSNLGIGHTRYATTGKCEL
ENCQPFVVETLHGKIAVAHNGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPP
QEQDDTPDWVARIKNLMKEAPTAYSLLIMHRDVIYAVRDPYGNRPLCIGRLIPVSDIN
DKEKKTSETEGWVVSSESCSFLSIGARYYREVLPGEIVEISRHNVQTLDIISRSEGNP
VAFCIFEYVYFARPDSMFEDQMVYTVRYRCGQQLAIEAPVDADLVSTVPESATPAALA
YAGKCGLPYVEVLCKNRYVGRTFIQPNMRLRQLGVAKKFGVLSDNFKGKRIVLVDDSI
VRGNTISPIIKLLKESGAKEVHIRVASPPIKYPCFMGINIPTKEELIANKPEFDHLAE
YLGANSVVYLSVEGLVSSVQEGIKFKKQKEKKHDIMIQENGNGLECFEKSGHCTACLT
GKYPVELEW"
BASE COUNT 645 a 370 c 481 g 584 t
ORIGIN
1 gcaggtcctt ccacgtgctt tcggcggcga catggagctg gaggagttgg ggatccgaga
61 ggaatgtggc gtgttcgggt gcatcgcctc aggagagtgg cccacgcagc tggatgtacc
121 gcatgtgatc actctgggac tcgtggggct gcagcaccgg ggtcaggaga gtgctggtat
181 tgtgactagt gatgggagtt ccgtgccaac attcaaatca cacaagggaa tgggtcttgt
241 aaatcacgtc tttactgaag acaatttgaa aaaattatat gtttcaaatc ttggaattgg
301 acacaccagg tatgccacca caggaaaatg tgaactagaa aattgtcagc ccttcgttgt
361 tgaaacactt catgggaaga tagctgtggc acataatggc gaattggtaa atgctgctcg
421 attaaggaaa aagcttctgc gtcatggtat tggtctgtct acaagttctg atagtgaaat
481 gattacccag ttactggcgt atacccctcc tcaggaacaa gatgacaccc cagactgggt
541 agccaggatt aaaaacttga tgaaggaagc acccacagca tactccctgc ttataatgca
601 cagagatgtt atttatgcag tacgagatcc ttatggaaat cgtcccttat gcattggtcg
661 tcttattcca gtgtctgata taaatgacaa agagaaaaaa acatcagaaa cagaaggatg
721 ggtggtgtct tcagaatctt gtagcttctt atctattggt gcaagatatt accgtgaagt
781 cttgcctgga gaaattgtgg aaatatccag acacaatgtc caaactcttg atattatatc
841 aaggtctgaa ggaaacccag tggctttttg tatctttgaa tatgtttatt ttgcaagacc
901 agacagtatg ttcgaagacc aaatggttta tacagtaaga taccgttgtg gccagcagct
961 agcgattgaa gcacctgtgg atgcagattt ggttagcact gttccagaat ctgctacgcc
1021 tgctgctctt gcttacgcag gaaagtgtgg acttccatat gtggaggtgc tgtgtaaaaa
1081 ccggtatgta gggagaacct tcattcagcc aaacatgagg ttaagacaac ttggtgttgc
1141 aaaaaaattt ggagtattgt cagacaactt taaaggcaaa agaattgttc ttgtagatga
1201 ttcaattgtc agaggcaata ccatctcacc tataataaaa ctgctcaaag aatctggtgc
1261 aaaagaggta cacattcgag tagcttcacc accaattaaa tatccatgct tcatgggaat
1321 aaacattcct acaaaagaag agctcattgc caataaacca gaatttgatc accttgcaga
1381 atatctagga gcaaacagtg ttgtgtatct gtcagtagaa ggactggttt catctgtaca
1441 agaagggata aagtttaaaa aacagaaaga gaaaaagcac gatattatga tccaagaaaa
1501 tggaaatggt ctggaatgtt ttgaaaagag tggtcattgt acagcttgtc tcactggaaa
1561 atatcctgta gaattagaat ggtagctggt agggttggat gtgtgtagtt tcaagataga
1621 aagttggtca agaagttata gtggtcacac ctcatctatt tactgttact cagttggtac
1681 aatgtaaaat gccatgctta tgtttataag ttttgagatt tttttttttt ctgaaaagga
1741 taccaaagtg cgataactga acatttccaa ttgcatataa tacaacaata tgtggtgttc
1801 ttttttttac acaagcattg gctagccttt ttaacctggt cagagaaggc aggtggtcac
1861 tgacatttcc caagtccatg ctttaaaggg tttgcaagaa gttagggtta aggagaggtg
1921 atgccaacaa gacaggtgag ttaaatatac catttcacac aaagtttgaa tagaatacat
1981 tatacctcat aggtgtctag cctctacagt tctggctgta gttatgacct tggcttccct
2041 gtctaactgt agacaaatct ttaaaaaaaa aaaaaaaaaa
//