LOCUS BC004173 4613 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens ankyrin repeat domain 17, mRNA (cDNA clone
IMAGE:2907081), partial cds.
ACCESSION BC004173
VERSION BC004173.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4613)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4613)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004173.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: g Column: 2.
FEATURES Location/Qualifiers
source 1..4613
/db_xref="H-InvDB:HIT000086303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2907081"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>4613
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/db_xref="GeneID:26057"
CDS 112..>4613
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/codon_start=1
/product="ANKRD17 protein"
/protein_id="AAH04173.1"
/db_xref="GeneID:26057"
/translation="MEKATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR
ARSASSPRGMVRVCDLLLKKKPPQQQHHKAKRNRTCRPPSSSESSSDSDNSGGGGGGG
GGGGGGGGTSSNNSEEEEDDDDEEEEVSEVESFILDQDDLENPMLETASKLLLSGTAD
GADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAA
LTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESLLCLACS
AGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTG
NTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAG
INTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA
RLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGASLEEVNDEGYTPLMEAA
REGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADFLIKAGADIELGCST
PLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDVADVLLQAGADLE
HESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVEL
LLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVTQLTPPSHD
LNRAPRVPVQALPMVVPPQEPDKPPANVATTLPIRNKAASKQKSSSHLPANSQDVQGY
ITNQSPESIVEEAQGKLTELEQRIKEAIEKNAQLQSLELAHADQLTKEKIEELNKTRE
EQIQKKQKILEELQKVERELQLKTQQQLKKQYLEVKAQRIQLQQQQQQSCQHLGLLTP
VGVGEQLSEGDYARLQQVDPVLLKDEPQQTAAQMGFAPIQPLAMPQALPLAAGPLPPG
SIANLTELQGVIVGQPVLGQAQLAGLGQGILTETQQGLMVASPAQTLNDTLDDIMAAV
SGRASAMSNTPTHSIAASISQPQTPTPSPIISPSAMLPIYPAIDIDAQTESNHDTALT
LACAGGHEELVQTLLERGASIEHRDKKGFTPLILAATAGHVGVVEILLDNGADIEAQS
ERTKDTPLSLACSGGRQEVVELLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLN
AGAEINSRTGSKLGISPLMLAAMNGHTAAVKLLLDMGSDINAQIETNRNTALTLACFQ
GRTEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSR
DTALTIAADKGHYKFCELLIGRGAHIDVRNKKGNTPLWLAANGGHLDVVQLLVQAGAD
VDAADNRKITPLMAAFRKGHVKVVRYLVKEVNQFPSDSECMRYIATITDKEMLKKCHL
CMESIVQAKDRQAAEANKNASILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKK
KKKKKK"
misc_feature 1297..1671
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/note="ANK; Region: ankyrin repeats"
/db_xref="CDD:cd00204"
misc_feature 3949..4329
/gene="ANKRD17"
/gene_synonym="FLJ22206"
/gene_synonym="GTAR"
/gene_synonym="KIAA0697"
/gene_synonym="NY-BR-16"
/note="ANK; Region: ankyrin repeats"
/db_xref="CDD:cd00204"
BASE COUNT 1338 a 999 c 1232 g 1044 t
ORIGIN
1 gtggcggcgg aggcggcacc gattgctgtg tcggccccag tgcggccgaa gtcgcggtag
61 agcgtagccc cacgcccctc ccccgtccgc gccctccctc tttccctggg gatggagaag
121 gcgacggttc cggtggcggc ggcgacggct gcagaaggag aagggagccc cccggcggtg
181 gcggctgtgg cgggcccccc cgcggcggcg gaggtcggcg gcggcgttgg cggcagcagc
241 agagctcgct cggcctcgtc tcctcgtggg atggtgcgag tctgcgacct gctcctgaag
301 aagaagccgc cgcagcagca gcaccacaag gccaagcgta accggacttg ccgacccccc
361 agcagcagcg aaagcagcag cgacagcgac aacagcggcg gcggtggagg cggcggtgga
421 ggcggaggtg gcggcggcgg caccagcagt aacaacagcg aggaagaaga ggacgacgac
481 gacgaggaag aggaggtttc tgaggtggag tctttcattt tggatcagga tgatttggaa
541 aatccaatgc tggaaacagc ttccaagttg ctcttatcag gtactgctga tggtgcagac
601 ctcaggacag tagatccaga aacacaggct agactggaag ctttactaga agctgcagga
661 ataggaaaat tgtccacggc tgatggtaaa gcctttgcag atcctgaagt acttcggagg
721 ttgacatcgt ctgttagttg tgcgttggat gaagctgctg ctgcacttac ccgtatgaga
781 gctgaaagca cagcaaatgc agggcagtcg gacaaccgca gtttggcaga agcctgttca
841 gaaggagatg taaatgctgt gcgaaagtta ctcattgaag ggcgaagtgt aaatgaacac
901 acagaggaag gggagagcct cctttgttta gcttgttctg ctggatacta tgagcttgca
961 caggttttgt tggcaatgca tgcaaatgtg gaagataggg gaatcaaagg tgacattaca
1021 cctttaatgg ctgctgctaa tggaggacat gtcaaaattg tgaagttgct gctagctcat
1081 aaagcagatg ttaatgcaca gtcttcaaca ggcaatacag cacttacata tgcttgtgct
1141 ggaggctatg tagatgttgt aaaggtgctc ttggaatccg gtgctagtat tgaggaccat
1201 aatgaaaatg gtcatacccc tcttatggaa gctggaagtg ctggacatgt ggaagtagcc
1261 agattgctgc tagaaaatgg ggctggcatt aatacgcatt ctaatgaatt taaagagagt
1321 gcccttacct tagcttgtta caaaggacac ttagagatgg tgcgatttct tttggaagca
1381 ggcgcggatc aagagcataa aacagatgaa atgcacactg ctctgatgga ggcttgcatg
1441 gatggccatg ttgaagtagc taggttactt cttgacagcg gtgcccaagt gaacatgcct
1501 gctgattcat ttgagtcacc attaactttg gctgcatgtg gtgggcatgt ggaacttgcg
1561 gctttactta ttgaaagagg agctagcctg gaagaggtca atgatgaagg ttatacacca
1621 ttgatggaag cagctcgaga aggacatgaa gaaatggtgg cattacttct tggtcaagga
1681 gcaaatatca atgcacagac agaagaaact caagaaactg ccttgactct ggcttgctgt
1741 ggaggctttc tggaagtggc agactttcta attaaggcag gagccgatat agaactaggg
1801 tgttctaccc ctttaatgga agctgctcaa gagggtcatt tggagttagt taaatactta
1861 ttagctgcag gagctaacgt tcatgcaaca acagcaacag gggatacagc actaacatat
1921 gcctgtgaaa atggtcatac tgatgtagca gatgtcttac ttcaggcagg cgcagatctg
1981 gaacatgaat ctgaaggtgg aagaactcct ttaatgaaag ctgcaagagc tggtcatgtt
2041 tgtactgttc agttcttaat tagtaaagga gcgaatgtga atagaaccac agctaataat
2101 gaccatactg tactgtccct ggcttgtgca gggggtcatc tggcagtggt ggaactactt
2161 ttggctcatg gggcagatcc tactcaccgt ttgaaagatg gctcaactat gttgatagaa
2221 gcagcaaaag gtggccatac aagtgttgtt tgctatctct tggattatcc taataacttg
2281 ctttcagccc ctccaccaga tgtcactcag ttaactcccc catcccacga tttaaatagg
2341 gctcctcgtg taccagttca agcactgccc atggttgttc cacctcagga gcctgacaaa
2401 ccacctgcca atgttgccac cactcttccc atcaggaata aagctgcttc taaacaaaag
2461 tccagcagcc atttgccagc aaacagccag gatgtacagg gttacatcac caatcagtct
2521 ccagagagca ttgtagaaga ggctcaggga aagttaacag aactggaaca gaggataaaa
2581 gaagccatag aaaagaatgc acagctgcag tccttggaac tggctcatgc tgaccaactt
2641 accaaggaga agatcgagga gctcaacaaa acaagggagg aacaaattca gaagaaacaa
2701 aagattttgg aggaactaca gaaagtagaa cgagagttac aactgaaaac tcagcagcag
2761 ctaaaaaagc agtatctaga ggttaaagct caaagaattc aacttcagca acagcagcaa
2821 cagtcttgcc aacacctggg attactaact cctgttggag ttggagagca gctttctgag
2881 ggagactatg cacggttaca gcaagtggat cctgttttac ttaaagatga accccagcag
2941 actgctgctc agatgggttt tgcgccaatc cagcctctgg cgatgcctca agctttgcct
3001 ctggcggcag gtcccttgcc tccagggtcc atcgcaaatc ttacagaact gcaaggagtg
3061 atagttggac agccagtact gggccaagca cagttggcag ggctggggca aggaattctg
3121 acagaaacac aacaagggtt aatggtagcc agccctgctc agaccctcaa tgacacgctg
3181 gatgacatca tggcagcagt cagtggaaga gcatctgcaa tgtcaaacac tcctacccac
3241 agtattgctg catccatttc ccaacctcag actccaactc caagtcctat catctctcct
3301 tcagccatgc ttcctatcta ccctgccatt gatattgatg cacagactga gagtaatcat
3361 gacacggcgc taacacttgc ctgtgctggt ggccacgagg aactggtaca aacactgcta
3421 gagagaggag ctagtataga gcaccgagac aagaaaggtt ttactccact catcttggct
3481 gccacagctg gtcatgttgg tgttgtggaa atattgctgg acaatggtgc agacattgaa
3541 gcccagtctg aaagaaccaa ggacacacca ctctccttgg cttgttctgg gggaagacag
3601 gaggtggtgg agctattgtt agctcgaggg gcaaataaag agcacaggaa tgtttctgat
3661 tacacacctc taagtctggc tgcttctggt ggctatgtga acatcatcaa aatattacta
3721 aatgcaggag ctgagattaa ctctagaact ggtagcaaat tgggcatctc tcctctgatg
3781 ttagcagcta tgaatgggca tacagctgct gttaagctcc tgttagacat gggctctgac
3841 ataaatgctc agatagaaac caatcggaac actgccctta ctttagcctg cttccaagga
3901 agaactgaag tggttagtct tctgcttgat agaaaagcaa atgttgaaca cagagctaag
3961 actggtctca caccactaat ggaagctgcc tctggtggat atgcggaggt gggccgagtt
4021 cttttggata aaggtgctga tgttaatgcc cctccagttc cctcctcaag agatacagct
4081 ttaaccatag cagcagataa agggcattac aaattctgtg agcttcttat tggcagggga
4141 gctcatattg atgtacgtaa caagaagggg aacactccat tgtggctagc agcaaatggt
4201 ggacacctcg atgtggttca gttactggtg caagcaggtg cagatgtgga tgcagcagat
4261 aaccgcaaga taactcctct tatggcagca tttagaaagg gtcatgtgaa ggtggtgcgc
4321 tacttagtca aagaagtcaa tcagtttcca tcagattctg aatgtatgag atacatagca
4381 accatcactg ataaggagat gctgaagaag tgtcatcttt gtatggagtc aatagtacaa
4441 gccaaagata gacaggctgc tgaagcaaac aaaaacgcca gcattttgtt agaggagtta
4501 gacttggaaa agttaaggga agaaagtcgg aggctggctt tggctgcgaa aagagaaaaa
4561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//