LOCUS BC004147 1498 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lysozyme (renal amyloidosis), mRNA (cDNA clone
MGC:2337 IMAGE:2959387), complete cds.
ACCESSION BC004147
VERSION BC004147.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1498)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1498)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC004147.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: g Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557893.
FEATURES Location/Qualifiers
source 1..1498
/db_xref="H-InvDB:HIT000031733"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2337 IMAGE:2959387"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1498
/gene="LYZ"
/db_xref="GeneID:4069"
/db_xref="HGNC:HGNC:6740"
/db_xref="MIM:153450"
CDS 20..466
/gene="LYZ"
/codon_start=1
/product="lysozyme (renal amyloidosis)"
/protein_id="AAH04147.1"
/db_xref="GeneID:4069"
/db_xref="HGNC:HGNC:6740"
/db_xref="MIM:153450"
/translation="MKALIVLGLVLLSVTVQGKVFERCELARTLKRLGMDGYRGISLA
NWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSAL
LQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV"
BASE COUNT 451 a 303 c 307 g 437 t
ORIGIN
1 ctctgaccta gcagtcaaca tgaaggctct cattgttctg gggcttgtcc tcctttctgt
61 tacggtccag ggcaaggtct ttgaaaggtg tgagttggcc agaactctga aaagattggg
121 aatggatggc tacaggggaa tcagcctagc aaactggatg tgtttggcca aatgggagag
181 tggttacaac acacgagcta caaactacaa tgctggagac agaagcactg attatgggat
241 atttcagatc aatagccgct actggtgtaa tgatggcaaa accccaggag cagttaatgc
301 ctgtcattta tcctgcagtg ctttgctgca agataacatc gctgatgctg tagcttgtgc
361 aaagagggtt gtccgtgatc cacaaggcat tagagcatgg gtggcatgga gaaatcgttg
421 tcaaaacaga gatgtccgtc agtatgttca aggttgtgga gtgtaactcc agaattttcc
481 ttcttcagct cattttgtct ctctcacatt aagggagtag gaattaagtg aaaggtcaca
541 ctaccattat ttccccttca aacaaataat atttttacag aagcaggagc aaaatatggc
601 ctttcttcta agagatataa tgttcactaa tgtggttatt ttatattaag cctacaacat
661 ttttcagttt gcaaatagaa ctaatactgg tgaaaattta cctaaaacct tggttatcaa
721 atacatctcc agtacattcc gttctttttt tttttgagac agtctcgctc tgtcgcccag
781 gctggagtgc agtggcgcaa tctcggctca ctgcaacctc cacctcccgg gttcacgcca
841 ttctcctgcc tcagcctccc gagtagctgg gattacgggc gcccgccacc acgcccggct
901 aattttttgt atttttagta gagacagggt ttcaccgtgt tagccaggat ggtctcgatc
961 tcctgacctt gtgatccacc cacctcggcc tcccaaagtg ctgggattac aggcgtgagc
1021 cactgcgccc ggccacattc agttcttatc aaagaaataa cccagactta atcttgaatg
1081 atacgattat gcccaatatt aagtaaaaaa tataagaaaa ggttatctta aatagatctt
1141 aggcaaaata ccagctgatg aaggcatctg atgccttcat ctgttcagtc atctccaaaa
1201 acagtaaaaa taaccacttt ttgttgggca atatgaaatt tttaaaggag tagaatacca
1261 aatgatagaa acagactgcc tgaattgaga attttgattt cttaaagtgt gtttctttct
1321 aaattgctgt tccttaattt gattaattta attcatgtat tatgattaaa tctgaggcag
1381 atgagcttac aagtattgaa ataattacta attaatcaca aatgtgaagt tatgcatgat
1441 gtaaaaaata caaacattct aattaaaggc tttgcaacac aaaaaaaaaa aaaaaaaa
//