LOCUS BC004129 2099 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glycosylphosphatidylinositol anchor attachment protein
1 homolog (yeast), mRNA (cDNA clone MGC:1312 IMAGE:3504366),
complete cds.
ACCESSION BC004129
VERSION BC004129.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2099)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2099)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004129.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6031166.
FEATURES Location/Qualifiers
source 1..2099
/db_xref="H-InvDB:HIT000031718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1312 IMAGE:3504366"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2099
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="MIM:603048"
CDS 111..1976
/gene="GPAA1"
/gene_synonym="GAA1"
/gene_synonym="hGAA1"
/codon_start=1
/product="glycosylphosphatidylinositol anchor attachment
protein 1 homolog (yeast)"
/protein_id="AAH04129.1"
/db_xref="GeneID:8733"
/db_xref="HGNC:HGNC:4446"
/db_xref="MIM:603048"
/translation="MGLLSDPVRRRALARLVLRLNAPLCVLSYVAGIAWFLALVFPPL
TQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKKSGALPVAWLERTMRSVGLE
VYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAASTESLVLTVPCGSDSTNSQAV
GLLLALAAHFRGQIYWAKDIVFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGA
IQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGKLQPED
WTSLDGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSFRQYKYDLVA
VGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMPAVGFLLLVLGLKALEL
WMQLHEAGMGLEEPGGAPGPSVPLPPSQGVGLASLVAPLLISQAMGLALYVLPVLGQH
VATQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAPDRGWMALKLVALIYLAL
QLGCIALTNFSLGFLLATTMVPTAALAKPHGPRTLYAALLVLTSPAATLLGSLFLWRE
LQEAPLSLAEGWQLFLAALAQGVLEHHTYGALLFPLLSLGLYPCWLLFWNVLFWK"
BASE COUNT 346 a 688 c 639 g 426 t
ORIGIN
1 cggaagtgcg ggcgagcgcg ggtccccggg tctgacagga gcagcctgtg ggcaccgcgg
61 cggtagttgg aggcgggaga gggtccgtag ccgcgccgcc ctgccccgcc atgggcctcc
121 tgtcggaccc ggttcgccgg cgcgcgctcg cccgcctagt gctgcgcctc aacgcgccgt
181 tgtgcgtgct gagctacgtg gcgggcatcg cctggttctt ggcgctggtt ttcccgccgc
241 tgacccagcg cacttacatg tcggagaacg ccatgggctc caccatggtg gaggagcagt
301 ttgcgggcgg agaccgtgcc cgggcttttg cccgggactt cgccgcccac cgcaagaagt
361 cgggggctct gccagtggcc tggcttgaac ggacgatgcg gtcagtaggg ctggaggtct
421 acacgcagag tttctcccgg aaactgccct tcccagatga gacccacgag cgctatatgg
481 tgtcgggcac caacgtgtac ggcatcctgc gggccccgcg tgctgccagc accgagtcgc
541 ttgtgctcac cgtgccctgt ggctctgact ctaccaacag ccaggctgtg gggctgctgc
601 tggcactggc tgcccacttc cgggggcaga tttattgggc caaagatatc gtcttcctgg
661 taacagaaca tgaccttctg ggcactgagg cttggcttga agcctaccac gatgtcaatg
721 tcactggcat gcagtcgtct cccctgcagg gccgagctgg ggccattcag gcagccgtgg
781 ccctggagct gagcagtgat gtggtcacca gcctcgatgt ggccgtggag gggcttaacg
841 ggcagctgcc caaccttgac ctgctcaatc tcttccagac cttctgccag aaagggggcc
901 tgttgtgcac gcttcagggc aagctgcagc ccgaggactg gacatcattg gatggaccgc
961 tgcagggcct gcagacactg ctgctcatgg ttctgcggca ggcctccggc cgcccccacg
1021 gctcccatgg cctcttcctg cgctaccgtg tggaggccct aaccctgcgt ggcatcaata
1081 gcttccgcca gtacaagtat gacctggtgg cagtgggcaa ggctttggag ggcatgttcc
1141 gcaagctcaa ccacctcctg gagcgcctgc accagtcctt cttcctctac ttgctccccg
1201 gcctctcccg cttcgtctcc atcggcctct acatgcccgc tgtcggcttc ttgctcctgg
1261 tccttggtct caaggctctg gaactgtgga tgcagctgca tgaggctgga atgggccttg
1321 aggagcccgg gggtgcccct ggccccagtg taccccttcc cccatcacag ggtgtggggc
1381 tggcctcgct cgtggcacct ctgctgatct cacaggccat gggactggcc ctctatgtcc
1441 tgccagtgct gggccaacac gttgccaccc agcacttccc agtggcagag gctgaggctg
1501 tggtgctgac actgctggcg atttatgcag ctggcctggc cctgccccac aatacccacc
1561 gggtggtaag cacacaggcc ccagacaggg gctggatggc actgaagctg gtagccctga
1621 tctacctagc actgcagctg ggctgcatcg ccctcaccaa cttctcactg ggcttcctgc
1681 tggccaccac catggtgccc actgctgcgc ttgccaagcc tcatgggccc cggaccctct
1741 atgctgccct gctggtgctg accagcccgg cagccacgct ccttggcagc ctgttcctgt
1801 ggcgggagct gcaggaggcg ccactgtcac tggccgaggg ctggcagctc ttcctggcag
1861 cgctagccca gggtgtgctg gagcaccaca cctacggcgc cctgctcttc ccactgctgt
1921 ccctgggcct ctacccctgc tggctgcttt tctggaatgt gctcttctgg aagtgagatc
1981 tgcctgtccg ggctgggaca gagactcccc aaggacccca ttctgcctcc ttctggggaa
2041 ataaatgagt gtctgtttca gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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