LOCUS BC004109 1287 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA
clone MGC:11042 IMAGE:3678259), complete cds.
ACCESSION BC004109
VERSION BC004109.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1287)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1287)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004109.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1287
/db_xref="H-InvDB:HIT000031710"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11042 IMAGE:3678259"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1287
/gene="GAPDH"
/gene_synonym="G3PD"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
CDS 53..1060
/gene="GAPDH"
/gene_synonym="G3PD"
/codon_start=1
/product="glyceraldehyde-3-phosphate dehydrogenase"
/protein_id="AAH04109.1"
/db_xref="GeneID:2597"
/db_xref="HGNC:HGNC:4141"
/db_xref="MIM:138400"
/translation="MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMV
YMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVF
TTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPL
AKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVG
KVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGY
TEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK
E"
BASE COUNT 320 a 382 c 325 g 260 t
ORIGIN
1 gtcagccgca tcttcttttg cgtcgccagc cgagccacat cgctgagaca ccatggggaa
61 ggtgaaggtc ggagtcaacg gatttggtcg tattgggcgc ctggtcacca gggctgcttt
121 taactctggt aaagtggata ttgttgccat caatgacccc ttcattgacc tcaactacat
181 ggtttacatg ttccaatatg attccaccca tggcaaattc catggcaccg tcaaggctga
241 gaacgggaag cttgtcatca atggaaatcc catcaccatc ttccaggagc gagatccctc
301 caaaatcaag tggggcgatg ctggcgctga gtacgtcgtg gagtccactg gcgtcttcac
361 caccatggag aaggctgggg ctcatttgca ggggggagcc aaaagggtca tcatctctgc
421 cccctctgct gatgccccca tgttcgtcat gggtgtgaac catgagaagt atgacaacag
481 cctcaagatc atcagcaatg cctcctgcac caccaactgc ttagcacccc tggccaaggt
541 catccatgac aactttggta tcgtggaagg actcatgacc acagtccatg ccatcactgc
601 cacccagaag actgtggatg gcccctccgg gaaactgtgg cgtgatggcc gcggggctct
661 ccagaacatc atccctgcct ctactggcgc tgccaaggct gtgggcaagg tcatccctga
721 gctgaacggg aagctcactg gcatggcctt ccgtgtcccc actgccaacg tgtcagtggt
781 ggacctgacc tgccgtctag aaaaacctgc caaatatgat gacatcaaga aggtggtgaa
841 gcaggcgtcg gagggccccc tcaagggcat cctgggctac actgagcacc aggtggtctc
901 ctctgacttc aacagcgaca cccactcctc cacctttgac gctggggctg gcattgccct
961 caacgaccac tttgtcaagc tcatttcctg gtatgacaac gaatttggct acagcaacag
1021 ggtggtggac ctcatggccc acatggcctc caaggagtaa gacccctgga ccaccagccc
1081 cagcaagagc acaagaggaa gagagagacc ctcactgctg gggagtccct gccacactca
1141 gtcccccacc acactgaatc tcccctcctc acagttgcca tgtagacccc ttgaagaggg
1201 gaggggccta gggagccgca ccttgtcatg taccatcaat aaagtaccct gtgctcaacc
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//