LOCUS BC004102 1791 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 3 family, memberA1, mRNA (cDNA
clone IMAGE:3689157), partial cds.
ACCESSION BC004102
VERSION BC004102.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004102.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: o Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907048.
FEATURES Location/Qualifiers
source 1..1791
/db_xref="H-InvDB:HIT000086284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3689157"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1791
/gene="ALDH3A1"
/gene_synonym="ALDHIII"
/gene_synonym="MGC10406"
/db_xref="GeneID:218"
/db_xref="HGNC:HGNC:405"
/db_xref="MIM:100660"
CDS <1..1541
/gene="ALDH3A1"
/gene_synonym="ALDHIII"
/gene_synonym="MGC10406"
/codon_start=3
/product="ALDH3A1 protein"
/protein_id="AAH04102.1"
/db_xref="GeneID:218"
/db_xref="HGNC:HGNC:405"
/db_xref="MIM:100660"
/translation="EVQRTPHPTFEYFFFLSRKLPGQELQGLNGREAGSLNTSPLGSC
RSRSPSYRERLCQRRHEQDQRGREARPRRLQLGRTRPLQFRIQQLEALQRLIQEQEQE
LVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIH
SEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLD
KDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPC
YVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGED
AKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQE
EIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDV
IVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPPSPAK
MTQH"
BASE COUNT 409 a 543 c 514 g 325 t
ORIGIN
1 cagaggtcca gaggacgcca caccccacat ttgaatattt ttttttcttg tcacgcaaac
61 ttcctgggca ggaactccaa gggctcaatg gacgggaagc agggtcctta aatacgtccc
121 ctcttggctc ttgccgttcc aggagcccca gttaccggga gaggctgtgt caaaggcgcc
181 atgagcaaga tcagcgaggc cgtgaagcgc gcccgcgccg ccttcagctc ggcaggaccc
241 gtccgctgca gttccggatc cagcagctgg aggcgctgca gcgcctgatc caggagcagg
301 agcaggagct ggtgggcgcg ctggccgcag acctgcacaa gaatgaatgg aacgcctact
361 atgaggaggt ggtgtacgtc ctagaggaga tcgagtacat gatccagaag ctccctgagt
421 gggccgcgga tgagcccgtg gagaagacgc cccagactca gcaggacgag ctctacatcc
481 actcggagcc actgggcgtg gtcctcgtca ttggcacctg gaactacccc ttcaacctca
541 ccatccagcc catggtgggc gccatcgctg cagggaacgc agtggtcctc aagccctcgg
601 agctgagtga gaacatggcg agcctgctgg ctaccatcat cccccagtac ctggacaagg
661 atctgtaccc agtaatcaat gggggtgtcc ctgagaccac ggagctgctc aaggagaggt
721 tcgaccatat cctgtacacg ggcagcacgg gggtggggaa gatcatcatg acggctgctg
781 ccaagcacct gacccctgtc acgctggagc tgggagggaa gagtccctgc tacgtggaca
841 agaactgtga cctggacgtg gcctgccgac gcatcgcctg ggggaaattc atgaacagtg
901 gccagacctg cgtggcccca gactacatcc tctgtgaccc ctcgatccag aaccaaattg
961 tggagaagct caagaagtca ctgaaagagt tctacgggga agatgctaag aaatcccggg
1021 actatggaag aatcattagt gcccggcact tccagagggt gatgggcctg attgagggcc
1081 agaaggtggc ttatgggggc accggggatg ccgccactcg ctacatagcc cccaccatcc
1141 tcacggacgt ggacccccag tccccggtga tgcaagagga gatcttcggg cctgtgctgc
1201 ccatcgtgtg cgtgcgcagc ctggaggagg ccatccagtt catcaaccag cgtgagaagc
1261 ccctggccct ctacatgttc tccagcaacg acaaggtgat taagaagatg attgcagaga
1321 catccagtgg tggggtggcg gccaacgatg tcatcgtcca catcaccttg cactctctgc
1381 ccttcggggg cgtggggaac agcggcatgg gatcctacca tggcaagaag agcttcgaga
1441 ctttctctca ccgccgctct tgcctggtga ggcctctgat gaatgatgaa ggcctgaagg
1501 tcagataccc cccgagcccg gccaagatga cccagcactg aggaggggtt gctccgcctg
1561 gcctggccat actgtgtccc atcggagtgc ggaccaccct cactggctct cctggccctg
1621 ggagaatcgc tcctgcagcc ccagcccagc cccactcctc tgctgacctg ctgacctgtg
1681 cacaccccac tcccacatgg gcccaggcct caccattcca agtctccacc cctttctaga
1741 ccaataaaga gacaaataca attttctaac tcaaaaaaaa aaaaaaaaaa a
//