LOCUS BC004101 1867 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens bridging integrator 1, mRNA (cDNA clone MGC:10367
IMAGE:3688734), complete cds.
ACCESSION BC004101
VERSION BC004101.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004101.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536381.
FEATURES Location/Qualifiers
source 1..1867
/db_xref="H-InvDB:HIT000031705"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10367 IMAGE:3688734"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1867
/gene="BIN1"
/gene_synonym="AMPH2"
/gene_synonym="DKFZp547F068"
/gene_synonym="MGC10367"
/gene_synonym="SH3P9"
/db_xref="GeneID:274"
/db_xref="HGNC:HGNC:1052"
/db_xref="MIM:601248"
CDS 61..1380
/gene="BIN1"
/gene_synonym="AMPH2"
/gene_synonym="DKFZp547F068"
/gene_synonym="MGC10367"
/gene_synonym="SH3P9"
/codon_start=1
/product="bridging integrator 1"
/protein_id="AAH04101.1"
/db_xref="GeneID:274"
/db_xref="HGNC:HGNC:1052"
/db_xref="MIM:601248"
/translation="MAEMGSKGVTAGKIASNVQKKLTRAQEKVLQKLGKADETKDEQF
EQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEANK
IAENNDLLWMDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESL
QTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLE
ENFHKEMSKLNQNLNDVLVGLEKQHGSNTFTVKAQPSDNAPAKGNKSPSPPDGSPAAT
PEIRVNHEPEPAGGATPGATLPKSPSQPAEASEVAGGTQPAAGAQEPGETAASEAASS
SLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQLRAGDV
VLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERVP"
BASE COUNT 438 a 531 c 587 g 311 t
ORIGIN
1 ggcgcgcaag atctccccgc gcgagagcgg cccttgccac cgggcgaggc ctgcgccgcg
61 atggcagaga tgggcagtaa aggggtgacg gcgggaaaga tcgccagcaa cgtgcagaag
121 aagctcaccc gcgcgcagga gaaggttctc cagaagctgg ggaaggcaga tgagaccaag
181 gatgagcagt ttgagcagtg cgtccagaat ttcaacaagc agctgacgga gggcacccgg
241 ctgcagaagg atctccggac ctacctggcc tccgtcaaag ccatgcacga ggcttccaag
301 aagctgaatg agtgtctgca ggaggtgtat gagcccgatt ggcccggcag ggatgaggca
361 aacaagatcg cagagaacaa cgacctgctg tggatggatt accaccagaa gctggtggac
421 caggcgctgc tgaccatgga cacgtacctg ggccagttcc ccgacatcaa gtcacgcatt
481 gccaagcggg ggcgcaagct ggtggactac gacagtgccc ggcaccacta cgagtccctt
541 caaaccgcca aaaagaagga tgaagccaaa attgccaagg ccgaggagga gctcatcaaa
601 gcccagaagg tgtttgagga gatgaatgtg gatctgcagg aggagctgcc gtccctgtgg
661 aacagccgcg taggtttcta cgtcaacacg ttccagagca tcgcgggcct ggaggaaaac
721 ttccacaagg agatgagcaa gctcaaccag aacctcaatg atgtgctggt cggcctggag
781 aagcaacacg ggagcaacac cttcacggtc aaggcccagc ccagtgacaa cgcgcctgca
841 aaagggaaca agagcccttc gcctccagat ggctcccctg ccgccacccc cgagatcaga
901 gtcaaccacg agccagagcc ggctggcggg gccacgcccg gggccaccct ccccaagtcc
961 ccatctcagc cagcagaggc ctcggaggtg gcgggtggga cccaacctgc ggctggagcc
1021 caggagccag gggagacggc ggcaagtgaa gcagcctcca gctctcttcc tgctgtcgtg
1081 gtggagacct tcccagcaac tgtgaatggc accgtggagg gcggcagtgg ggccgggcgc
1141 ttggacctgc ccccaggttt catgttcaag gtacaggccc agcacgacta cacggccact
1201 gacacagacg agctgcagct cagggctggt gatgtggtgc tggtgatccc cttccagaac
1261 cctgaagagc aggatgaagg ctggctcatg ggcgtgaagg agagcgactg gaaccagcac
1321 aaggagctgg agaagtgccg tggcgtcttc cccgagaact tcactgagag ggtcccatga
1381 cggcggggcc caggcagcct ccgggcgtgt gaagaacacc tcctcccgaa aaatgtgtgg
1441 ttcttttttt tgttttgttt tcgtttttca tcttttgaag agcaaaggga aatcaagagg
1501 agacccccag gcagaggggc gttctcccaa agattaggtc gttttccaaa gagccgcgtc
1561 ccggcaagtc cggcggaatt caccagtgtt cctgaagctg ctgtgtcctc tagttgagtt
1621 tctggcgccc ctgcctgtgc ccgcatgtgt gcctggccgc agggcggggc tgggggctgc
1681 cgagccacca tgcttgcctg aagcttcggc cgcgccaccc gggcaagggt cctcttttcc
1741 tggcagctgc tgtgggtggg gcccagacac cagcctagcc tggctctgcc ccgcagacgg
1801 tctgtgtgct gtttgaaaat aaatcttagt gttcaaaaca aaatgaaaca aaaaaaaaaa
1861 aaaaaaa
//